Thermococcus paralvinellae: TES1_1249
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Entry
TES1_1249 CDS
T03005
Name
(GenBank) DEAD/DEAH box RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ths
Thermococcus paralvinellae
Pathway
ths03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ths00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TES1_1249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ths03019
]
TES1_1249
03009 Ribosome biogenesis [BR:
ths03009
]
TES1_1249
Enzymes [BR:
ths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TES1_1249
Messenger RNA biogenesis [BR:
ths03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TES1_1249
Ribosome biogenesis [BR:
ths03009
]
Prokaryotic type
rRNA helicases
TES1_1249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF80631
UniProt:
W0I3I1
LinkDB
All DBs
Position
1192351..1193499
Genome browser
AA seq
382 aa
AA seq
DB search
MSFEKLGLSENTLGAVRRKGFSEPTDIQREVIPLFLKGNADIVGQSQTGTGKTASFALPL
VDVINEYEREVQAIILTPTRELALQVADEIKSLRGKKRIRVLSVYGGQPIGPQIRTLRKG
VHIVVGTPGRVLDHIRRGTLRLDGIQYFILDEADRMLDMGFIDDIRAIFRETPRNKRVLM
FSATMPREVLRLAKRYMEKYELIRTSSDEPVPGLVEQEYIEVVPARKISVLKRILDGEFH
GIIFCQTKRETRILAEKLAHMGYNAEALNGDMNQRSRERTLMRFKRRKINILVATDVAAR
GIDVQDIAHIVNYSLPQNAEMYIHRIGRTGRAGKKGKAITFIKPGEYRRLRYIESVAKVS
IKKSKLQESIDREKRRDSRKRY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgagaaattaggactctcagaaaatacgctgggagcagtcagaagaaaaggg
ttctcggaacctacagacattcagagggaagttatccctctgtttttgaaaggaaatgca
gacatagttggacaatcacagacaggaactggaaaaactgcatcattcgcattaccgctt
gtagatgttatcaacgagtatgaaagggaagtccaagcaataattttaacgccaaccaga
gagcttgctcttcaagtagctgacgagataaagtcgcttagaggtaagaaaaggataaga
gttctttcagtatatggaggacagccaataggtcctcagataagaacccttaggaaagga
gttcacatagtagttggaacccctggaagagttctcgatcacatcagaagaggcacgtta
aggcttgatggaattcaatacttcatcctagatgaagctgacaggatgctcgatatgggt
ttcatagatgatataagagcaatattcagagagacaccaagaaataagcgtgtccttatg
ttttcagcaacgatgccccgcgaagttttgaggctagcaaaacgatacatggagaaatat
gagctgataagaacaagcagcgacgagccagttccaggacttgtggagcaagagtatatt
gaagttgtaccagcaagaaaaatatctgtgctgaaaagaatactagacggtgaatttcat
ggaataatcttctgccaaacgaagagagagactaggatactggcagaaaagctcgcacat
atgggatacaatgctgaagctttaaatggagacatgaaccaaagaagtagagaaagaacc
ttgatgcgcttcaaaagacgaaaaataaacattctagttgccacagatgttgctgcaaga
ggaatagacgttcaagacatagctcacattgtaaactattccttgccacaaaacgctgaa
atgtatatccacaggattggcagaacaggacgagcgggcaaaaaaggaaaagcaataact
ttcatcaagccgggagagtatagaaggttaagatacattgagagcgttgcaaaagttagc
ataaagaaatcaaagcttcaagaaagcatagacagagaaaagaggagagactcaagaaaa
agatactga
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