Thalassotalea sp. HSM 43: E2K93_00210
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Entry
E2K93_00210 CDS
T05926
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2K93_00210 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tht03400
]
E2K93_00210 (recC)
Enzymes [BR:
tht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E2K93_00210 (recC)
DNA repair and recombination proteins [BR:
tht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E2K93_00210 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBY02887
UniProt:
A0A4P7JH22
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All DBs
Position
complement(36925..40383)
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AA seq
1152 aa
AA seq
DB search
MFYIYPANRMEDLLTLFIKIRHLKPLPILAKEVVMVQSQGLQHWLNMEVANANKISMNSD
FVLPAQYLWKLLRNLCEDKFPEQTPYSREVLSWRIDNLLQSERVLADERCRDANIYWQDD
LACQPLKRYQLACQLADLYEQYLIYRPEWLSSWRDGKAIADSDHLFAKTEQWQMAIWQHL
QQEISYDPQDLLTIAEQQIDDLKHLLPRRVSLFGINALAPMWLQFLDLLSEHIDVHVFHL
NPCFEFWGDIQTDKALAKQQYLQHIGKWPETIESSEGINPLLANLGQQGREFLSLLHNIN
NIEIPLYDELYETSEESPEGDVSLLLRLQKDILTLHDKRQSPQAIVDDSVVITSAHSALR
EVQGLHDYLLQLFNDDPQLTPKDVIVMCPQVESYAAYIDSVFVRGWEDVGEGVPPLPCSI
ADRISKESEPLVHAFSELLSMADGRYSVASILSLLQLESVQQRFSIHAGDIDKVSDWLQK
AHIYWGLDAEHKKHLLESNQQTDQFTWQQGLSKLIKGFAFVDQDMLLDESVVLANVEGND
AVLLGKIILFLEQLQVMQRLLNSKKTPNQWFEFLTNQVQRLFAPSDRDYGLEIINNALAQ
LQEYAEQATYQTPIELNVIREFLNQHFSQPDPGRQFMIGQITFCSMMPMRSIPFKVVAVL
GLNDGEYPRQRTPLGFDLMQLSDAKAGDRSRRGDDKYLFLEAMISARQHLYLSYQGRDIK
NNNERQPSIVLRELMEYLHAAYKWDISDASSSQLRQLPLQAFAKENYIASTRFPSFDKNW
LALTKLDSVPEQQQEASSALSNVTIAETLAVDDLIRFYQHPCRYFARQQLKLMFNETNTL
IEDVEPFAADGLSRYLFMGEALQLSLQGDVSQNLALQKEFAIKSGEFPDIPTTPETMQEW
QQQMLSFALSIEQHLAPSLQRETVNPDQPDNIGQQQLVLCVDAKDSLSDHKTLDDAGDTL
ALQLDANIATFDVADSLVCVDYRHASLKGKDLVRLYLNHLFACVKHPDKNVTSYGYYFSQ
GKQDKEDKLNIATLSAVDNAKQVLSQWVATYITGQHQALLLDPEIAFKYMINRQKFSDKM
PVQSVFSKAWKKDDFGYNSGFSDDPYIDYFFPECPDIERIWPDLIDHFRPLFQHLQLQNV
SLTQVNDVEERF
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
ttgttttatatatatccggcaaatcgcatggaagatttgctgactctgtttataaagatt
cgacatctcaagccattacctatattggctaaagaagtggtcatggtgcaaagtcagggc
ttacagcattggcttaatatggaagttgcaaacgccaataaaatcagtatgaacagcgat
tttgtgttgcctgcacagtatttgtggaaattattgcgcaacttgtgcgaggacaaattt
cctgagcaaacgccgtattccagagaagttctcagctggcgaatagacaacttattgcaa
tctgagcgggtattggctgacgaacgctgtcgtgacgccaatatttattggcaggatgat
ttagcttgccaacctttaaagcgctatcaattggcgtgccagctggcggatctatatgag
cagtatttaatttatcgaccagaatggctgagcagttggcgtgatggaaaagccattgcc
gatagcgatcacttgttcgctaagaccgaacaatggcagatggcaatatggcagcatttg
caacaagagatcagctacgatccgcaagatttattgaccattgctgaacaacaaattgat
gacttaaaacacctgttacctaggcgagtttccttgtttggcattaatgcgttggcgccg
atgtggttgcaattcttagacttgttatctgaacatatcgatgtgcacgtgtttcattta
aacccgtgttttgaattctggggtgatatacaaaccgacaaggcgttggcgaaacagcag
tacttgcagcatataggcaaatggccagaaaccatagaaagcagcgaaggcattaatcca
ttgttggctaatttaggccaacaggggcgcgaattcctttctttgttgcacaacattaat
aacatcgaaatcccgctttatgatgaactttacgagaccagtgaagagtcacccgagggg
gatgtgtcgctattattgcgactgcaaaaagacatcttaacgctgcatgataaacgccaa
tcaccacaagcaatcgttgatgattcggttgtcataaccagcgcacacagtgctttgcga
gaagtgcaggggttacatgattatctgttgcagttgtttaatgatgatccgcaattaacg
ccaaaagatgtgattgtgatgtgcccacaagtcgagtcttatgcggcctatattgattcg
gtgtttgtgcgtggctgggaagatgtcggcgaaggtgtaccccctctgccatgttctatc
gctgatcgcatcagcaaagaaagcgaaccactggtgcatgcgtttagcgaattgctgagc
atggctgatggtcgttattctgttgcctctatattgtcgttattgcaattagaaagtgtg
cagcagcgtttctcgatacatgcaggcgacattgataaagtcagtgattggttgcaaaaa
gcacatatctattggggcttagatgccgagcataaaaagcatttactcgaatcaaaccaa
cagacggatcagtttacctggcagcaaggtcttagcaagttaataaaaggctttgcgttc
gttgaccaagatatgttgttagatgaatctgtggtgctcgctaatgtcgaaggtaatgat
gcggttttgctcggcaaaattattctgtttcttgaacaacttcaggtgatgcagcgcctt
ctaaatagcaagaaaacaccgaatcaatggtttgaatttctcactaatcaagtgcaacga
ctattcgcaccgagtgacagagactacggtcttgaaatcatcaataatgcgttagcgcaa
ttgcaagaatacgccgagcaggcaacatatcagacgcctattgagttaaacgtcatacga
gagtttttaaatcagcatttttctcagccagatcctgggcgacagtttatgattggccag
atcactttttgttcgatgatgccgatgcgttccattccatttaaggtggttgcagtacta
ggcctaaatgatggcgagtaccctcgacaacgtaccccgcttggctttgatctgatgcaa
ttaagtgatgccaaagccggcgataggtctcgacgtggtgatgataagtatttgttttta
gaggcgatgatctcggcacggcaacatttatatttaagttatcaaggccgagacataaag
aacaataacgagcgccaaccatcgatcgtgcttagagagttgatggagtatttacacgcg
gcctacaaatgggacatttctgatgcaagtagcagtcaactgaggcaattaccgttgcaa
gcatttgctaaagaaaactatattgccagtactcgatttccaagtttcgataaaaactgg
ttggcgttaaccaaactcgattcggtgccagagcaacagcaagaggcgagttccgccttg
tcgaacgtcactatcgcggagactttggctgttgatgatttaatccgcttttatcaacac
ccttgtcgttattttgcccgtcaacaattaaagttaatgtttaatgaaaccaatacctta
attgaagacgttgaaccgtttgctgctgatggcttaagtcgatatctgtttatgggcgag
gcgctgcagctgtcattgcagggcgatgttagccaaaacctcgctttgcaaaaagagttt
gccatcaaatcaggagaatttcctgatataccgaccacacctgaaaccatgcaagaatgg
caacagcaaatgctcagtttcgcattgagtattgaacagcatttggcgccatcgttacag
cgagaaacggttaatccagatcaaccagataacattggccagcagcaattagtgctctgt
gtcgacgctaaggacagtcttagtgaccacaaaacgcttgacgatgcaggggatactctg
gcgttacagcttgacgctaacatagcaacgttcgatgttgcagactcgctagtttgtgtt
gactatcgacatgccagtttaaagggcaaagacttggtgcgcctctatctaaatcattta
tttgcctgcgttaaacaccctgataaaaatgtcaccagttatggttattatttcagccaa
ggcaaacaggacaaagaagacaagctcaatattgcgactttatctgcggtggacaatgct
aaacaagtattaagtcaatgggtggcgacgtacatcacagggcagcatcaggcgttgtta
ctcgaccctgaaatcgcatttaaatacatgataaacagacagaagtttagcgataaaatg
cctgttcaaagtgtctttagtaaagcctggaaaaaggatgattttggctataatagtggc
ttttccgacgacccttatattgactatttctttccagagtgtcctgatattgagcgtata
tggcctgaccttatcgatcattttcgtcctttgtttcaacacttacaattgcaaaatgtc
tcgttgacacaagtgaatgatgttgaggagcggttttag
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