Thalassotalea sp. HSM 43: E2K93_00305
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Entry
E2K93_00305 CDS
T05926
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K93_00305 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tht03019
]
E2K93_00305 (pnp)
03016 Transfer RNA biogenesis [BR:
tht03016
]
E2K93_00305 (pnp)
Enzymes [BR:
tht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E2K93_00305 (pnp)
Messenger RNA biogenesis [BR:
tht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E2K93_00305 (pnp)
Transfer RNA biogenesis [BR:
tht03016
]
Prokaryotic type
tRNA degradation factors
E2K93_00305 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
KH_SLS1_2
DUF3016
aRib
Motif
Other DBs
NCBI-ProteinID:
QBY02904
UniProt:
A0A4P7JJ23
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All DBs
Position
complement(64470..66578)
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AA seq
702 aa
AA seq
DB search
MTPITKTFEFGQHKVTLETGVIARQATAAVMASMDDTSVLVSVVGKKEAVPGQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEEETLTARLIDRPIRPLFPDGYTNEVQVVITVVSAN
PEIAPDIISLLGTSAALAISGMPFNGPVGAARVGYVNDQYVLNPLQSELEESKLDLVVAG
TESAVLMVESEADVLSEEVMLGAVVYGHEQSQTAINAIKEFAAEVNNPAWDWQAPAKNEA
LVAQIAELATADITDAYQITEKAKRYDAIGEIKNRVIEQLSANVAEGEEFDAGDAKDLIH
DLEKKIVRERITQGAPRIDGRDPEMVRALDVMTGVLPRTHGSAVFTRGETQALVTATLGT
QRDAQRVETILGEKTDNFMLHYNFPPYCVGETGFIGSPKRREIGHGRLAKRGILAVMPDA
EDFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKDSVAGIAMGLVKEGENFVVL
SDILGDEDHLGDMDFKVAGTQGGITALQMDIKIEGITQEIMQIALNQAKGARIHILSVMD
EAISEARDDISDFAPRIHTMKIDSDKIRDVIGKGGATIRQLTEETGTTIEIEDDGTVRIA
ATSGEQAKDAISRIEAITAEIEVGKLYTGKVVRIVDFGAFVNVLPGKDGLVHISQIAEER
VNNVSDHLSEGQEVTVKVLEVDRQGRVRLSMKEVDVKGDSAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgactccgatcacgaaaacatttgaattcggacagcataaagtaacactggaaacaggt
gttattgctcgtcaagcaacggctgctgtaatggcatcaatggacgacacgagcgtacta
gtctctgtagtaggtaaaaaagaagcagtacctggtcaagacttcttcccactaacagta
aactatcaagaaaaaacatacgcagcaggtaaaattcctggtggtttcttcaaacgtgaa
ggtcgtccttctgaagaagaaacattaactgcacgtcttattgaccgtccaattcgtcct
ctattccctgacggctacaccaacgaagtacaagtggttatcactgttgtttctgctaac
ccagaaattgcccctgatatcatttcacttctaggtacgtctgcggcgctagctatttca
ggtatgccttttaatggccctgtaggtgccgctcgagttggttacgttaacgatcaatac
gtattgaacccacttcaatcagaacttgaagaaagcaaattagacttggttgttgccggt
actgaatctgcagtactaatggttgaatcagaagccgacgtgctttctgaagaagtcatg
ctaggcgctgttgtatacggtcatgagcaatcacaaactgctatcaatgcaattaaagag
tttgctgctgaagtaaacaaccctgcatgggactggcaagcacctgcgaaaaatgaagca
cttgttgctcaaatcgcagaattagcgacagctgatattactgacgcttaccaaattact
gaaaaagccaaacgttacgatgcgattggtgaaatcaaaaaccgcgttattgaacaactt
tcagccaatgttgctgaaggcgaagagtttgatgccggtgatgccaaagacttaattcac
gatctagagaagaaaatcgtacgtgagcgcattacacaaggtgctcctcgtattgatggc
cgtgatccagaaatggttcgtgcgcttgacgtaatgactggtgttcttcctcgtacgcac
ggttctgcggtatttacccgtggtgaaactcaggcactagtaacagcgaccttgggtaca
caacgtgacgctcaacgtgtagaaaccattttgggtgagaagactgacaactttatgttg
cactacaacttccctccatactgtgttggtgaaactggttttatcggttcacctaagcgt
cgtgagattggtcacggtcgtttagcaaagcgcggtatcttggctgttatgcctgatgca
gaagatttcccatactcagttcgtgtggtttctgaaatcaccgaatcaaatggttcatca
tcaatggcatcagtatgtggtacgtcattagcacttatggatgctggtgtacctattaaa
gattctgtcgctggtatcgcaatgggtcttgttaaagaaggtgagaactttgttgttctt
tctgacatcctaggtgacgaagatcacttgggtgacatggactttaaagttgctggtact
caaggtggtatcactgcattgcaaatggatattaagatcgaaggtattacgcaagagatc
atgcaaattgcccttaatcaggcaaaaggcgcgcgtattcatatcctaagtgttatggat
gaagcgatcagcgaagctcgtgatgatatctctgatttcgctccgcgtatccacaccatg
aaaattgattcagataagatccgtgatgttatcggtaaaggtggtgcaaccatccgtcaa
ttgacagaagagactggcacaaccatcgaaattgaagatgatggtacggttcgcattgca
gcaacatctggtgaacaagcgaaagacgctatctctcgtatcgaagcgattaccgctgaa
atcgaagtaggcaagttgtacacgggtaaagttgtacgcatcgttgactttggtgcattc
gtaaatgtattacctggtaaagatggtcttgtacatatctcacaaattgctgaagagcgt
gtgaacaatgtgtcagatcacttgtctgaaggtcaagaagttacggttaaagtacttgaa
gttgaccgtcaaggccgtgttcgtttaagcatgaaagaagttgacgttaaaggcgattca
gctgagtaa
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