KEGG   Thalassotalea sp. HSM 43: E2K93_01165
Entry
E2K93_01165       CDS       T05926                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
tht  Thalassotalea sp. HSM 43
Brite
KEGG Orthology (KO) [BR:tht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tht03016]
    E2K93_01165 (rnd)
Enzymes [BR:tht01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     E2K93_01165 (rnd)
Transfer RNA biogenesis [BR:tht03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    E2K93_01165 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC DNA_pol_A_exoN DUF5945 Methyltransf_14
Other DBs
NCBI-ProteinID: QBY03061
UniProt: A0A4P7JIB7
LinkDB
Position
complement(256993..258123)
AA seq 376 aa
MVQFSYISDENELVQYCQQASSKDLVCIDTEFVRTRTLFPNLGLLQIYDGEQLALIDPEA
IADLSPFWQLLQNPDVLKVIHSCSEDLEVFLRAGQCRPVNMLDSQIAMAFLGHGLSMGYA
AMIKHYLGLELDKSESRTDWLKRPLSQRQLEYAAADVYHLYQICDRVIDEINEAGFYQAL
MMESEWQIEKKFSPIDPLKLYLDNKSAWKLQPRNLAILQHLLAWRYEQAVRRNLPLTFVA
KDATLFTLAYKNPKSVGAMANFEGIDILDIRHKGKAMLNVMRKVNELPDDELPKQMSRLD
SYPNYKNTFKAVKQKLTELAAQNNLDIAVVAGKRQIHQLLTWHWQLNEQSEQSVELLQGW
RGELFAQPVRDFLQSL
NT seq 1131 nt   +upstreamnt  +downstreamnt
attgtgcagttttcttacattagcgacgaaaatgaactcgtccaatattgccaacaggca
tccagcaaagacctggtatgtattgataccgagtttgttcgcacccgtaccttatttcca
aatcttggcttattgcaaatctatgatggtgagcaacttgccctgattgatccggaagcg
attgctgatttgtcgcctttttggcagttattgcaaaaccctgatgtattgaaagtgatt
cattcatgctctgaagacttagaagttttcttaagagcggggcagtgtcgcccggtcaat
atgctcgactcgcaaatagcgatggcatttcttggtcatggtttgtcgatgggatatgcg
gcgatgatcaagcattatcttggtttggaattagataaaagtgaatcgcgaaccgattgg
cttaaacgcccgttaagtcagcgtcagttagaatacgccgcagccgacgtttatcatctc
taccaaatttgtgatcgtgtgatagacgaaatcaacgaagctggtttttatcaagcttta
atgatggaaagcgaatggcaaatcgagaagaaatttagcccaatcgacccgctgaaactg
tatttagataacaaatccgcgtggaaacttcagccgcgtaacctggcgattttgcagcat
ctattggcttggcgttatgaacaggcggtgcgtcgtaatttgccgctcacctttgttgca
aaagacgctactttgttcacattggcatataaaaacccgaaaagcgttggcgcgatggca
aactttgaaggaattgatattctcgatatccgccacaaaggcaaggccatgcttaatgtg
atgcgcaaagttaatgagttgccagatgacgagctgccaaagcaaatgtctcgcttagac
agttaccctaattacaaaaacacctttaaagcggtaaagcaaaaactcacagaactggcg
gcgcagaataaccttgatatcgccgttgttgccggtaagcgtcaaatacatcaattgctt
acttggcactggcagctgaacgagcaaagcgaacaaagtgttgagctgttgcaaggctgg
cgcggcgagttgtttgctcaaccagtacgtgactttttacaatctctataa

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