Thalassotalea sp. HSM 43: E2K93_03140
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Entry
E2K93_03140 CDS
T05926
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K93_03140 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tht03019
]
E2K93_03140 (rppH)
Messenger RNA biogenesis [BR:
tht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2K93_03140 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QBY03428
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All DBs
Position
complement(749410..749976)
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AA seq
188 aa
AA seq
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MIDAEGFRANVGIVITNGKGQVFWARRYNQHSWQFPQGGVDEGESAEQTMFRELYEEVGL
KPHQVEVIATSKHWLKYRLPKRLIRHDSNPVCIGQKQKWFLLKLTCADEDVDLLHSSHPE
FDDWRWVSYWYPVRQVVSFKRDVYRRVMKEFSPIALPKGQYENSDFRSSKPRKGHNQRRN
HRRRKAKS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgccgaaggctttagagccaacgtcggcatagtaattacaaatggtaaaggc
caggtgttttgggccagacgctataatcagcattcatggcagtttccgcaaggtggtgtc
gatgaaggtgaatcagctgaacaaaccatgtttcgtgaattatatgaagaagttggctta
aagccacaccaagtagaagtcatagcaacgtctaagcattggttaaaatatcgattaccg
aaacgcttgatcagacacgacagcaaccctgtatgtattggtcaaaagcaaaaatggttt
ttattaaagctcacttgcgctgatgaagatgttgacttgttgcattcctctcatcccgaa
tttgatgactggcgatgggtaagttactggtatccagtacgacaagttgtatcatttaag
cgcgatgtctatcgtcgagtgatgaaagagttttcgccaatagcgttaccgaaagggcag
tacgaaaatagtgattttagatcgagtaagccaagaaaaggccataatcaacgaagaaac
caccgccgtcgtaaagcaaaaagttag
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