Thalassotalea sp. HSM 43: E2K93_06430
Help
Entry
E2K93_06430 CDS
T05926
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K93_06430 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tht03019
]
E2K93_06430 (recQ)
03400 DNA repair and recombination proteins [BR:
tht03400
]
E2K93_06430 (recQ)
Enzymes [BR:
tht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2K93_06430 (recQ)
Messenger RNA biogenesis [BR:
tht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2K93_06430 (recQ)
DNA repair and recombination proteins [BR:
tht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E2K93_06430 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF4851
Motif
Other DBs
NCBI-ProteinID:
QBY06147
UniProt:
A0A4P7JQ68
LinkDB
All DBs
Position
complement(1506238..1508007)
Genome browser
AA seq
589 aa
AA seq
DB search
MLSQYFGFDSFRVGQQQVIEQLISGRDCLVLMPTGGGKSLCYQLPAAILPGLTVVVSPLI
ALMKDQVDGLVRQGIGAAYINSSLSQQEINNTMQRIASGEIKTLYVAPERLLSHYFLQAL
ASMHIAFFAIDEAHCISQWGHDFRPSYTQLGRIKEHFPYTPVIALTATADVTTRKDILTQ
LRLQNPYVHLDSFDRPNIRYTLTERYNGERQILEYLNQNPDDSGIIYCSSRWQVDNLCKK
LAQQGVNCAGYHAGMETEVRHVIQDGFTKDNIRVVVATVAFGLGINKPNVRFVIHYDTPR
TLEAFYQETGRAGRDGLPAEALFLFDNQDIDKVKKRIMQNDNDHRVNVELQRFASMAGFA
EAQTCRRQVLLNYFAEYTEQACGNCDICLDPPSTYDGTVDAQKVLSCVYRIGQSGDIHYL
IDVLRGRDNDKVSNNKHHQVSTFGIGKDKTRGYWFNVIRQLIHLGMLQQDIEKQSALQLT
NASRSILKGETALMMARPRLQSQSYWQQSKAKVSYDKSLFKKLRTLRKEIADAEDIAPFI
VFNDATLIEMAKYKPTNSTAFLSISGVGETKLARYGRPFMQLIEENISA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgttaagccagtattttggcttcgacagttttcgtgtgggtcagcaacaggtaattgaa
caattaatcagtgggagagattgtttggtgttgatgccgaccggcggtggtaagtcgctg
tgttatcaattacccgccgcgatattgccgggtcttacggtggtggtgtcaccactgatt
gcgttgatgaaagatcaggtcgatggcctagtgcgccaaggtatcggtgcagcgtacatc
aattcttcgttatcacaacaagaaattaataacaccatgcagcgtattgccagtggtgag
attaagactttgtatgtggcaccggaacgattgcttagccattattttttacaagcattg
gcaagcatgcacatcgctttttttgccattgacgaggcgcattgtatttctcagtgggga
cacgactttaggccatcctatacccaattaggtcgcattaaagagcatttcccttatacc
cctgtcattgcgctaacggcgaccgcggatgtgactacccgtaaggatatccttacccag
ttacgcttacaaaacccttatgtgcatttagacagttttgaccgtcccaacattcgctac
accctaaccgaacgttacaatggcgagcgccagattctcgaatacttaaaccaaaatcca
gatgacagcggcattatttattgctcgagtcgttggcaagtcgacaatttgtgcaaaaag
ctagcgcaacaaggggttaactgtgccggatatcatgcgggcatggaaactgaggttcga
catgttattcaagatggtttcaccaaagataacattcgggttgtggtggcaaccgttgcc
tttggtctaggtattaataagcctaatgtgcgctttgtgattcactacgatacaccgcgt
accttagaagctttttatcaagaaacgggtcgtgccggacgtgatggtttgccggcagaa
gcgttgtttctttttgataatcaagatatcgataaagtgaaaaagcgcattatgcagaat
gacaatgaccacagagtcaatgttgagttgcaacgctttgcctcgatggctggttttgcc
gaagctcagacttgtcgtcgtcaggtgttattaaattattttgcggaatataccgaacaa
gcttgcggtaattgtgacatttgccttgacccgccaagtacctatgacggcacggtcgat
gcacaaaaggtgttgtcttgtgtctatcgtatagggcaaagcggtgacattcattatctt
attgatgtgctacgtggtcgcgataatgacaaagtgagcaacaataaacatcatcaagta
tcaacgtttggtattggtaaagataaaacccgtggttattggtttaatgtcatccgccaa
cttatccacctcggtatgttgcagcaggatattgaaaaacaatcagcgctgcaattgacc
aacgcatcacggtcgatattgaaaggcgaaacagcactgatgatggccagaccgcgattg
caaagtcagagttattggcagcaaagtaaagcgaaagtcagctacgataaaagcttattt
aaaaagcttcgtacattgcgcaaagagattgccgatgccgaagacattgcgccgtttatc
gttttcaatgacgcaaccttgattgaaatggccaagtacaaacctaccaatagcactgca
tttttatcgattagtggcgttggggaaacaaaattggcccgctatggcaggccatttatg
caattgatcgaggaaaacatcagcgcttaa
DBGET
integrated database retrieval system
