Thalassotalea sp. HSM 43: E2K93_06515
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Entry
E2K93_06515 CDS
T05926
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03420
Nucleotide excision repair
tht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2K93_06515 (uvrD)
03430 Mismatch repair
E2K93_06515 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tht03400
]
E2K93_06515 (uvrD)
Enzymes [BR:
tht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2K93_06515 (uvrD)
DNA repair and recombination proteins [BR:
tht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2K93_06515 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E2K93_06515 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF7432
Motif
Other DBs
NCBI-ProteinID:
QBY04057
UniProt:
A0A4P7JJZ8
LinkDB
All DBs
Position
complement(1527227..1529395)
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AA seq
722 aa
AA seq
DB search
MDVSELLDSLNDKQREAVAAPSKNLLVLAGAGSGKTRVLVHRIAWLMQVEDVSAHSILAV
TFTNKAAAEMRGRVEQAVGGNVHGMWVGTFHGLAHRLLRMHFQEAKLPQSFQVLDSDDQL
RLIKRVIRSLQLDEKKWPAKQAMWYINGKKDEGLRPKHIDNQYDPTEATYIKIYQVYQET
CDRAGLVDFAELLLRAHELWLNNPILLEHYQQRFTRILVDEFQDTNAIQYAWLSLLGQKH
GNMMIVGDDDQSIYGWRGARIENIQSFSKDFDAETIRLEQNYRSTKNILNAANALIDNNN
NRLGKDLWTDGVDGEAISVYTAFNELDEARFVASRIKQWVEEGNSLDDVALLYRSNAQSR
LLEEALLQGQIPYRIYGGLRFFERQEIKDALAYLRLINNRNDDASFERIINTPTRGIGNK
ALTYIRDAARSHGATLWDACRHLLKHDELSGRAKNAVQGFVELIDQLEDDIIELNLDEQA
KKVIHHTGLHAMYQAEKGERAAARIENLNELVTACSTFEVNDEVEDMTPLTAFLTHAALE
AGESQADEYEAAVQLMTLHSAKGLEFPMVFMVGMEEGMFPSQQSAEDIVRLEEERRLCYV
GMTRAMQKLFLTHAETRRLYGQEKYHRQSRFLKEIPDQFLQEIRMRNQVSKPKTTGRFSN
TISLETFENTGFKLGQRVMHNKFGEGVVLNFEGAGKQARVQVNFEQSGSKWLVVAYANLQ
AI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcagaactcctcgattcgttaaatgataagcaacgtgaagcggttgctgca
ccgagtaaaaacttattggtattggccggtgccgggtcgggtaaaactcgagtattagtg
catcgtatcgcttggttaatgcaagtcgaagacgtatcggcacacagtatattggcggta
acctttaccaacaaagctgcagcagaaatgcgtggtcgtgttgagcaagcggttggcggt
aatgttcatggcatgtgggttggtactttccatggtttggctcatcgtttattgcgcatg
cactttcaagaagcaaaattaccacaaagttttcaggtacttgattcagatgatcagctg
agactaattaagcgagtgattcgttcgttacagcttgatgagaagaagtggccggcgaaa
caagcgatgtggtacatcaatggtaaaaaagatgaaggcttacgtcctaagcacattgat
aaccaatatgatccaacagaagccacctacattaagatttatcaagtgtatcaagagacc
tgtgatcgcgccggtttagttgatttcgctgagttactattacgcgctcatgagttatgg
ctaaataacccaatcctacttgagcattatcaacaacgattcactcgcatcttagtcgac
gaattccaagataccaatgccattcaatatgcctggttaagtttgctcgggcaaaaacat
ggcaacatgatgatagttggtgatgatgaccaatccatttacggttggcgtggcgctcgt
attgagaacatccaaagcttcagcaaagactttgacgccgaaaccatacgccttgagcaa
aattatcgttcaacaaaaaacattcttaatgccgctaatgcactaatcgataacaataac
aatcgcttaggcaaagacttgtggaccgacggtgttgatggtgaagccatttctgtgtac
accgcttttaatgaattagatgaagctcgatttgttgcttcacgcataaagcaatgggtt
gaagagggcaatagtctagatgacgtcgccttgctgtatcgttcaaatgcgcaatcacgc
ttacttgaagaagcattattgcaggggcagatcccatatcgcatttacggcggtttgcgc
ttcttcgaacgccaagaaatcaaagatgcattggcctatctgcgactgatcaacaatcgt
aatgacgatgcctcatttgagcgaattattaacaccccaacccgcggcattggtaataag
gcgttgacttacattcgtgatgcggcgcgcagtcatggtgcgacgctctgggatgcctgt
cgccatttgttgaaacacgatgaattaagtggtcgagcaaaaaacgccgtacaaggcttt
gttgagttaattgaccaacttgaagatgacattatcgagcttaaccttgatgaacaggcg
aaaaaagtcattcaccatactggtttgcatgcgatgtatcaggcggaaaaaggtgaacgt
gctgccgcgcgtatcgaaaaccttaatgagctggtgaccgcttgctcaacatttgaggtg
aacgatgaggttgaagacatgacgcctttaacagcgtttttaacccatgcagcgttggaa
gcgggtgagtcgcaagccgatgaatacgaagccgcggtgcaactaatgactttacactcc
gccaaaggcttggagtttccaatggtgtttatggtgggcatggaagagggcatgtttccg
tcgcagcaatcggctgaagacattgtccgtctcgaggaagagcgtcgtttatgttatgtc
gggatgacccgagccatgcaaaagctgtttttaacccatgccgaaacacgtcgcttatac
ggtcaagaaaagtatcatcgccaaagtcgattcttaaaagaaataccggatcaatttctg
caagaaattcgcatgcgcaaccaagtcagtaagccgaaaaccaccggccgttttagcaat
accattagcttagaaacatttgaaaataccggttttaaacttggtcaacgtgtaatgcac
aacaagtttggtgaaggcgtggtattaaattttgaaggcgccggtaagcaagctcgagtg
caggttaactttgagcaatcgggcagtaaatggttggttgtcgcctacgcaaacctacaa
gcgatatag
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