Thalassotalea sp. HSM 43: E2K93_09705
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Entry
E2K93_09705 CDS
T05926
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E2K93_09705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tht03019
]
E2K93_09705
03009 Ribosome biogenesis [BR:
tht03009
]
E2K93_09705
Messenger RNA biogenesis [BR:
tht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E2K93_09705
Ribosome biogenesis [BR:
tht03009
]
Eukaryotic type
Pre-60S particles
RNases
E2K93_09705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
QBY06183
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All DBs
Position
2265015..2265560
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AA seq
181 aa
AA seq
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MAVDANNLVWLDLEMTGLDPEQDVILEIATIITDADLNILAEGPVFAIHQSDHVLTNMNE
WCIKQHGASGLTERCRQSTTSLAEAERHTIAFIEQYVDKGVSPMCGNSIGQDRRFINAYM
KDFEQWFHYRNVDVSTIKELVRRWQPELLDKVSKQGTHLALDDIRESIAELQTYRKWVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagatgcaaacaatctagtatggttagatttagagatgaccggactcgatcct
gaacaggatgttattcttgaaattgccacaatcattaccgatgccgacttaaatattctt
gccgaaggtccggtatttgctattcatcagtctgaccatgtgctcaccaatatgaatgaa
tggtgcattaaacagcatggtgcaagcggcttgaccgagcgctgtcgtcaatcaacaacg
agtttggcagaagcggaacgacacaccatcgcatttatagagcagtatgttgataaaggc
gtatcgccaatgtgtggtaactctataggtcaggatcgccgctttattaatgcctatatg
aaagattttgaacagtggtttcattaccgcaatgtagacgtcagtaccatcaaagaattg
gtgcgtcgctggcaaccagaattactcgataaagtgagtaaacaaggcacccatttggcg
cttgatgatattcgtgaatcgatagccgaattacaaacttaccgtaaatgggtctttaaa
atttaa
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