Thalassotalea sp. HSM 43: E2K93_10210
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Entry
E2K93_10210 CDS
T05926
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K93_10210 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tht03019
]
E2K93_10210 (pcnB)
Enzymes [BR:
tht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
E2K93_10210 (pcnB)
Messenger RNA biogenesis [BR:
tht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2K93_10210 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
QBY04736
UniProt:
A0A4P7JM53
LinkDB
All DBs
Position
complement(2377651..2378994)
Genome browser
AA seq
447 aa
AA seq
DB search
MTKNADSKQTQNQQFPIVFGRDEHNVSRNELSENALKVLYRLNRGGYDAYLVGGGVRDIL
LGQHPKDFDIVTNATPEQIKKLFRNCRLIGRRFRLAHIVFGRDIIEVATFRGHHKEDHCD
KQKLSKQSEQGMLLRDNIYGSIDEDAERRDFTINALYYSIKDFKVYDFANGVADIESRTI
RLIGDPETRYREDPVRMLRAIRFATKLDMDIDPKTREPIKSLAPLMANIPPARMFEEYMK
LFLGGKALENFDMLAEYELLQYFFPHISEDIKHNSDGNAVKFVRTVLRNTDARINQGKRV
TPAFLLAAVIWHRIESQIQVFTAQHNMPYQDAFFSAMHEVMSEQQRCIAIPKRFQLPMKD
IWFLQQKLEQREPKKVFKTIEHPRFRAGYDFLLIRSEIEQGDLVELANWWTHFQEATPDT
QQQMLKSFRPTRQRRRRNPRKRKKAAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaacgctgacagtaagcaaacacaaaatcaacaatttccgatcgtgttcgga
cgcgatgaacataatgtttcacgcaatgaactgagtgaaaatgcgctgaaagtgttatac
cgacttaaccgaggtggttatgatgcctaccttgtaggtggtggtgtgcgcgacatctta
ttgggtcaacacccaaaagattttgatattgttaccaacgcaacgccagaacagataaag
aaactatttagaaattgccgtcttatcggccgccggtttcgccttgctcatattgtattt
ggtcgtgacattatcgaagtggcaacctttcgaggtcatcacaaagaagatcattgtgat
aaacaaaagctgtcgaaacaatctgaacaaggcatgctgctcagagataatatctatggc
agcatagacgaagacgctgagcgccgtgacttcaccatcaatgccttgtactacagcatt
aaagatttcaaagtttatgattttgccaatggtgtcgccgatatcgaaagtcgcacgatt
cgtttgattggcgatccggaaacacgataccgagaagatccagtgcgtatgctgcgggca
atccgctttgcgaccaaattggatatggatattgatcctaaaactcgtgaaccaataaag
tcattagcaccacttatggccaatatcccaccggctcgtatgttcgaagaatatatgaag
ttatttcttggtggcaaagctctagaaaactttgacatgttggcggaatatgagctgttg
cagtacttcttcccgcatattagtgaagatattaagcataatagcgatggcaatgcggtg
aaatttgtacgcaccgtactgcgcaataccgatgcccgcatcaatcaaggtaagcgggta
acaccagcatttttattagcggcagttatctggcaccggatcgaatcgcaaatacaagtc
tttacagcacaacataacatgccgtatcaagatgcgttctttagcgctatgcatgaagtg
atgtcagagcaacaacgttgtattgcgattcctaaacgctttcaattaccgatgaaagac
atctggttcttacaacaaaaattggaacaacgcgaaccgaagaaggttttcaaaaccata
gaacacccgcgctttcgtgctggttatgacttcttgttgatccgtagcgaaattgagcaa
ggtgacttggttgagttggctaattggtggacccactttcaagaagccacgcctgataca
cagcaacaaatgctaaaaagttttcgaccgactcgccagcgtcgtcgccgtaatccgcgc
aaacgcaagaaggcagctgagtaa
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