Thalassotalea sp. HSM 43: E2K93_10245
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Entry
E2K93_10245 CDS
T05926
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tht
Thalassotalea sp. HSM 43
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tht03016
]
E2K93_10245 (thpR)
Enzymes [BR:
tht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
E2K93_10245 (thpR)
Transfer RNA biogenesis [BR:
tht03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
E2K93_10245 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QBY04742
LinkDB
All DBs
Position
complement(2385596..2386132)
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AA seq
178 aa
AA seq
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MRLFFALSPSQDKKQQIEQWRQQHITSLGRPVPSANYHVTLAFIGQVTPSQLPSLIALAN
NIDNPPIHMTLNTLQCWPKPKVLFLGCQHSDTPIYQLAEQLQQGCRQLGFDIIERQYVPH
LTLCRNTAHLPDVDDTIIKTLNLSLSFFDFCLYQSVSSNQGVRYDVLHRWPLTAQQTQ
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcgattattttttgcactatctccaagccaagataaaaaacagcaaattgagcaatgg
cgacaacaacacatcaccagtcttggccgaccggtgccgtctgccaattaccatgtgacg
ctggcgtttattggtcaggttaccccatcgcaattgccaagcctgatagcgctggcgaat
aacattgataacccgccaatacatatgacgctaaacactttgcaatgctggccaaaacct
aaggtgttatttcttggctgtcagcacagtgatacaccaatttaccaacttgccgaacag
ttacaacagggctgtcgtcagcttggttttgatatcatcgagcgccaatatgtaccgcac
ctgaccttatgtcgaaacaccgcacatttgcctgatgtcgatgatacgatcatcaagacg
cttaacctgtcgctgtcattcttcgacttttgtttataccagtcggtttccagcaaccag
ggagtaagatatgatgtgctgcatcgctggccactcaccgcgcagcaaacacaataa
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