Thalassotalea sp. HSM 43: E2K93_11000
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Entry
E2K93_11000 CDS
T05926
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
tht
Thalassotalea sp. HSM 43
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tht03021
]
E2K93_11000 (rapA)
Transcription machinery [BR:
tht03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
E2K93_11000 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
DUF6863
Helicase_RecD
AAA_34
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QBY04877
UniProt:
A0A4P7JM36
LinkDB
All DBs
Position
complement(2551530..2554433)
Genome browser
AA seq
967 aa
AA seq
DB search
MTFSLGQRWISDSESDQGLGTIVDISGRFVTVLYTATGESRQYAIKDAPLTRVIFSVGDV
IPSHENFSITVSEVQSTDELYTYIGERLDNGETIALKEMMLDHFIKFNKPHDRLMNGQFD
RLDWYQLRKSSLQYQYQQQQSDLTGLLGGRVSLIPHQLHIAEEVGKRFAPRVLLADEVGL
GKTIEAGLIIHQQLVSGRAQRVLIAVPESLMHQWLVEMLRRFNLRFSIFDEERCQQYDGE
ENPFSSEQLVLVNLDFLSHNAEQFENIANEDWDLLVVDEAHHLQWSASEPSIEYQCIEIL
AHSIPGVLLLTATPDQLGHESHFARLRLLDSNRFYDYQAFLKEEGGYQQVADAANSVLAE
QGLTSAQQTTLKELIAESDIEPLLLDLQQDDERRDNAKQSLLSMLLDRHGTGRILFRNSR
NTIKGFPKRQLFSQELALPVQYDAVMNQLIESSDIEELRTRDVSKYLFTPETLYHLDARE
DNWTEFDPRVDFLIDLLLQNRQQKVLVICAHAQTAKDLEQALRIKEGIRAAVFHEGMSIF
ERDKAAAYFAQQEDAAQVLLCSEIGSEGRNFQFAHHLVLFDLPTNPDLLEQRIGRLDRIG
QTEDIALHVPYFANSPQGMLLNWYHNALDAFEHTCVTARAVYERFSHDVNTLALQGIWQD
EAMTNLIEASKELHLQLKKDLEQGRDKLLEINSSGQGHAQALVSRIGKQDASFDLPTYMF
GVFDVFGLNQDDRSDNGIALTPSEHMLSSNFPHLPEDGTTVTFDRDTALSNEDYQLLTWD
HPMVTGAMDMVLSDDIGNASIGILTNPAIPVGTFFVECIYTLAAMAPSQLQVGRYLPTTP
IRILLDKNGNDLSDKVAESVFDNQLSPVKKQVGLQLVKALKSQIPAIVDKAEQHSNSKIA
SLIAKAKQQMQQSLTQEHQRLTALASINPNVRQSEIDFIVHQQQELEHVIDHAQLKFEAI
RLIVVSS
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgacgttttctttgggtcagcgctggatcagcgacagtgaatcagatcaaggtctgggt
acgattgtcgatatttctggtcgttttgtcactgtgttatacacagcaaccggcgaatct
cgccaatacgcgattaaagatgcgcctctgactcgggttatcttctccgtcggagatgtc
attccttcacacgaaaatttcagtattaccgttagcgaagttcaatctaccgacgaactg
tatacctatattggtgaacgattggataacggtgagaccatcgcgttaaaagaaatgatg
ttagatcatttcatcaaatttaataaaccacacgatcgcttaatgaatggtcaatttgat
cgtttagactggtatcaactgcgcaaatcatctttgcaatatcaatatcaacagcagcaa
tccgatctcaccggcttactcggtggtcgtgtttcattgattccacaccagctacatatt
gctgaagaagttggtaaacgatttgctccaagagtattgcttgccgatgaagtgggctta
ggtaaaaccatagaagcaggtttgatcatccatcagcaactggtatcaggccgagcacaa
cgggttcttattgccgtgcctgaatcattgatgcaccaatggctagtggaaatgctgcgt
cgctttaatctcaggttcagcatttttgatgaagagcgatgccaacaatatgatggtgaa
gaaaacccattcagtagcgaacaactggtactcgtcaatctcgatttcctatctcacaat
gctgagcaatttgaaaatattgcaaacgaagattgggacctgttggtggtcgacgaggca
catcatctgcagtggtcagcaagcgaaccttcgattgaatatcaatgtatcgaaattctt
gcccacagcattcccggtgtgttgttgctaaccgcaacaccagaccaacttggtcatgaa
agccatttcgcacgattgcgcttgctcgatagcaatcgtttttatgactaccaagcgttt
ctcaaagaagaaggcggctatcaacaagttgccgacgcagccaatagtgtattagcagag
caaggcttaacgagtgcacagcaaaccacgctaaaagagctgattgccgagtctgatatc
gaaccactgctgcttgacttgcaacaggatgatgagcgccgagataacgccaaacagtcg
ttactatccatgttgttagatagacatggtaccggtcgtattctatttagaaactcgcga
aataccataaaaggctttccaaaacgtcagctatttagccaagaattggcgttacctgtg
cagtatgacgcagtcatgaatcagctaattgaaagctcggatatagaagagttaagaacc
cgcgacgtaagtaagtacctatttacccccgagactctttaccatttagatgcccgagaa
gataactggactgagtttgatcctagggtcgactttttaatcgacttgttattgcaaaat
cgtcagcaaaaagttctggttatttgtgcgcatgcacaaacggcaaaagaccttgaacag
gcgttaagaataaaagaaggcattcgtgccgcagtttttcatgaaggtatgagtatcttc
gaacgcgataaagcggccgcctattttgctcagcaagaagatgcagcgcaagtcttattg
tgttcggaaatcggttccgagggacgcaacttccaatttgcccatcatttggtgttattc
gatttaccaaccaacccagatttattagagcagcgtattggtcgcctcgaccgaatagga
caaaccgaggatatcgctttgcatgtgccttattttgccaactcgccacaaggcatgttg
ctcaattggtaccataatgcactcgatgcgtttgagcatacctgcgtcactgcgcgtgcg
gtttatgagcgattttctcatgacgtaaatacgttagccttgcaaggcatatggcaagac
gaagcgatgaccaacctgattgaggctagcaaagagctgcatttgcaactcaaaaaagac
cttgaacaaggccgcgataaactgttggagatcaattcatcaggccaaggacacgcgcaa
gcattggtaagtcgtattggcaaacaagacgccagttttgacttaccaacgtatatgttt
ggcgtgtttgacgtgtttggtctcaatcaagacgaccgcagtgacaacggcattgctctg
acacctagcgagcatatgctcagttctaatttcccacatttaccggaagacggcactacg
gtcacctttgatcgtgatacggcattaagtaatgaagattatcaattactgacctgggat
catccgatggtaactggcgcgatggacatggtgctcagtgatgatattggtaatgccagt
ataggtattttaaccaacccagcgattcctgtcggtaccttctttgttgagtgtatttat
actttagcggctatggcaccaagccagttgcaagtggggcgttatctgccaaccacacca
atccgtatattgcttgataaaaacggcaatgatttatctgacaaggtcgccgagtcggta
tttgataatcagttatctccggtgaaaaagcaggtcggtttgcaactagttaaggcgctt
aagagtcagatcccagctattgtcgataaagcggaacagcacagtaacagcaagatcgcc
agcctcattgccaaggcgaaacagcaaatgcaacagtcactgacacaagaacatcagcgt
ttaaccgcccttgcgagcattaatcctaacgtgcgacaatctgagattgattttattgtt
catcaacaacaagagcttgaacacgttattgatcatgcgcaattaaagtttgaagccatc
cgcttaattgtggtcagcagctaa
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