Thalassotalea sp. HSM 43: E2K93_14585
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Entry
E2K93_14585 CDS
T05926
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tht
Thalassotalea sp. HSM 43
Pathway
tht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2K93_14585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tht03019
]
E2K93_14585
03009 Ribosome biogenesis [BR:
tht03009
]
E2K93_14585
Enzymes [BR:
tht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E2K93_14585
Messenger RNA biogenesis [BR:
tht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E2K93_14585
Ribosome biogenesis [BR:
tht03009
]
Prokaryotic type
rRNA helicases
E2K93_14585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Utp25_C
AAA_30
Flavi_DEAD
CYNS_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBY05521
UniProt:
A0A4P7JPN7
LinkDB
All DBs
Position
3333329..3335146
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AA seq
605 aa
AA seq
DB search
MTDTNNAAVSFDDLGLPEFLLSAIKDMGFSVPTPIQEKTIVPLLQGHDVLGEAQTGTGKT
AAFGLPALAKIDTKLRRPQMLVLAPTRELAIQVAEALEDFAKNVKGLRIATLYGGQSYGP
QLSQLEKGAQVVVGTPGRLMDHLRRKTLKLADVSFCALDEADEMLNMGFLEDIEWILDHL
AKDTQMALFSATMPPAIKKVADRFLDKPVHVKIAHKKESKKNITQLAWKVTGVNKNTALE
RIIETQDFDAMLIFVRTRNDTITVSELLERQGYPCAALNGDMNQAQRERTVEQLKNGKIS
VMIATDVVARGLDIPRIDMVINYDLPGDTESYVHRIGRTGRAGREGTALSFVRPREMYNL
RHYERATSGQINSFEMPAIEEIGKKRVQRVQKEIMDIAAKQDLSHMMKVLEQMTEQTEFS
MEYLAAALLYQKQLKQPLQPKEDPRERRMRDDRRDGRDNRDERRARSDRGERRGDRRPER
GNERRTERNDNRPDRGERRRSSGPRVEVDWQAYRIEVGKEHGARPGDIVGAIANEISLDS
AYIGQIDLHEQHSIVHLPKGMPKDSYNKLRTVRIRRKQLDITVSDEAVAAAPRRRTNKGE
RRRAH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccaacaatgctgccgtcagctttgacgacttaggcttgcctgaattttta
ttatctgcaattaaggacatgggctttagtgttccaactccgattcaggaaaaaaccatt
gtacctttactacaagggcacgatgtattgggtgaagcccaaaccggtacaggtaaaact
gctgcgtttggtttaccagcgctagcaaaaattgatactaaattgcgtcgtccgcaaatg
ttagtcttggctccaacacgtgagttggcgattcaggttgctgaggcgttagaagacttt
gcgaaaaacgttaaaggtttacgcattgccacgttatacggtggtcaatcatacggtcca
caattatcacagctagaaaaaggtgcacaagttgttgttggtacccctggccgtttaatg
gatcacttgcgtcgtaaaacattaaagctagctgatgtaagcttttgtgcattagacgaa
gcggatgagatgttaaacatgggtttcttggaagatattgagtggattcttgatcatctt
gcaaaagacacccaaatggcgttgttctctgctactatgccaccagcaatcaaaaaagtt
gccgatcgtttccttgacaagcctgtgcatgtaaaaatcgcacataagaaagagtcaaag
aaaaacatcactcagttggcatggaaagtaaccggtgttaataaaaacactgcacttgag
cgtatcattgaaactcaagactttgatgcaatgttgatattcgtgcgtactcgtaatgac
acaattacagtaagcgagctgttagagcgtcaaggttacccttgtgctgcattgaatggt
gatatgaaccaagcacagcgtgagcgcaccgttgaacagcttaaaaacggtaagatttct
gtgatgatcgccaccgatgttgttgcacgtggtttggatattccacgcattgacatggta
atcaactatgacttaccaggcgatactgaatcatacgtgcaccgtatcggtcgtaccggt
cgtgcaggtcgcgaaggtaccgcattgtcatttgttcgtcctcgcgaaatgtacaacttg
cgtcactacgaacgtgctacctctggtcaaatcaatagttttgaaatgccagctatcgaa
gaaatcggtaaaaagcgtgttcaacgtgtgcaaaaagaaatcatggacatcgctgctaag
caagacttatctcacatgatgaaagtgcttgagcaaatgaccgaacagactgaatttagc
atggaatatttggccgctgccttgttgtatcaaaagcagcttaaacagcctctacaacca
aaagaagatcctcgtgaacgtcgtatgcgtgatgatcgtcgagatggtcgtgacaatcgt
gatgagcgtcgtgctcgtagcgaccgcggtgaacgtcgtggtgatcgtcgcccagaacgt
ggtaatgaacgtcgcacagaacgtaatgacaatcgtccagatcgtggtgaacgtcgtcgc
agttcaggtcctcgtgtagaagttgattggcaagcataccgtattgaagtaggtaaagag
catggtgctcgtcctggtgatatcgttggtgccattgcaaatgaaatctcattggatagt
gcatacattggtcaaatcgatttacacgaacaacattcgatcgtgcatttaccaaaaggt
atgccgaaagattcatacaacaagctacgtacagtacgtattcgtcgtaagcagcttgat
atcacagtgtcagatgaagcggttgcagcagctccgcgtcgtcgtaccaacaaaggtgag
cgtcgtcgcgcccactaa
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