Thalassotalea sp. HSM 43: E2K93_16015
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Entry
E2K93_16015 CDS
T05926
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tht
Thalassotalea sp. HSM 43
Brite
KEGG Orthology (KO) [BR:
tht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tht03032
]
E2K93_16015 (gyrA)
03400 DNA repair and recombination proteins [BR:
tht03400
]
E2K93_16015 (gyrA)
Enzymes [BR:
tht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E2K93_16015 (gyrA)
DNA replication proteins [BR:
tht03032
]
Prokaryotic type
DNA Topoisomerases
E2K93_16015 (gyrA)
DNA repair and recombination proteins [BR:
tht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E2K93_16015 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Motif
Other DBs
NCBI-ProteinID:
QBY05773
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Position
3655718..3658423
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AA seq
901 aa
AA seq
DB search
MTDLAKEIVPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHDLGNDWN
KGYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMQKISHALLADLEKETVDFVPNYDGQEFMPSVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVNGCIAMIENPDITTEELIEYIPAPDFPTSGIISGVAGIHEAYKTGRGKL
NIRARTEIEVDEKTSKETIVVHELPYQVNKARLIEKMAELVKEKRIEGISALRDESDKDG
MRMVIEVKRGEVGEVVLNNLFKLTQMQISFGMNMVALSNGQPKLFNLRDMIDEFILHRRE
VVTRRTIFELRKARERAHILEGLAVALSNIDPIIECIKSSPTAAEAKEKLTAQGWDLGNV
SDMLERAGVDAARPEWLEPEFGFRDGKYYLTMQQAQAILDLRLQKLTGLEHEKILNEYKE
LLDIIAELLHILSSPERLMEVIREELEAIREEFGDERRSEISLSSHDLSLEDLITEEDVV
VTLSHEGYCKYQPLSEYEAQRRGGKGKAATKMKDEDFIERLLVANTHDTILCFSDRGKLY
WLKVYQLPLATRTARGRPIVNILPLDSDERITAILPVREYEEDKYIVMATASGTIKKTPL
TAYSRPRANGIIALNLRDDDTLIGVDITDGHDDIMLFSDEGKVVRFNEMARDSETGEIKV
DAETGEQIHALRAMGRTATGVRGIKLEGDQKVVSLIIPRSDGAVLTVTENGYGKRTALEE
YPAKSRATKGVVSIKVSDRNGPVVGAVQVDDNDEIMLITDNGTLVRTRVNEVGIIGRNTQ
GVRLIRTAEDENVVGLQRIEEIDEDDELLEGEEGAPTADGDAQPEPEAEQAEADDAEASD
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctggctaaagaaatcgttcctgtcaatattgaagatgaattaaagaattca
tacctggattacgccatgagtgtaatcgtaggtcgtgctttacctgatgtacgtgatggt
ttaaaaccagtgcatcgtcgtgtgctatatgcaatgcacgatttaggtaatgactggaac
aagggctataaaaaatctgcccgtgttgttggtgacgtaatcggtaaatatcacccacat
ggtgataccgctgtttatgacactattgttcgtatggctcagccattctcgcttcgctac
atgttggttgatggtcaaggtaacttcggttctgttgatggcgactctgcagcggcaatg
cgttatacggaaatccgcatgcagaaaatctcgcatgccttacttgccgaccttgaaaaa
gaaactgttgattttgtgccgaactacgacggccaagagtttatgccttcagttttacca
acgcgtgtacctaacctgttaattaatggttcatccggtatcgcggttggtatggcaacc
aatattccaccgcataacctaacggaagtcgtcaatggctgtattgccatgattgaaaat
ccagacattactaccgaagaattaattgaatacattccggcaccagacttcccgacctcg
ggtattatctctggcgttgcgggtattcatgaagcatataaaaccggtcgcggtaaatta
aatattcgtgctcgcactgaaattgaagtagacgagaaaacaagcaaagagaccattgtt
gttcacgaattaccgtaccaggtaaacaaagctcgccttattgaaaaaatggctgagcta
gtaaaagaaaaacgtattgaaggtatttcagccctacgcgatgagtctgataaagacggt
atgcgcatggttattgaagttaagcgcggtgaagtgggtgaggttgtattaaacaaccta
ttcaaactaacacaaatgcaaattagctttggtatgaacatggttgcgctttcaaatggc
caaccaaaactgtttaacttacgcgatatgattgatgagttcatcttgcatcgtcgtgaa
gttgtaacacgtcgtactatctttgaacttcgcaaagcgcgtgagcgtgcgcacatcttg
gaaggtttggcggtagcgttatcgaatatcgatcctatcatcgaatgcatcaaaagctcg
ccgacagccgctgaagcaaaagagaagctaacggctcaaggttgggatttaggcaatgtt
tctgacatgcttgaacgtgcaggtgttgatgccgcgcgtccagaatggttagaaccagaa
ttcggtttccgtgatggtaaatattacctaaccatgcaacaagctcaggctattttggac
ttacgtctacaaaagcttactggtcttgagcacgaaaagattctaaatgagtacaaagag
ttattagacatcatcgctgaattgctacacattttatctagccctgaacgtttaatggaa
gttattcgtgaagagttagaagcgattcgtgaagagtttggtgatgagcgtcgctcagaa
atctcattatcatctcatgatttgtccctagaagatttaatcactgaagaagacgttgtc
gtgaccttatctcatgaaggttactgtaagtatcaaccgcttagtgaatacgaagcgcaa
cgtcgtggtggtaaaggtaaagctgcaaccaagatgaaagatgaagatttcattgaacgt
ctgttggttgccaatacccatgatacgattttatgtttctctgaccgaggcaagttgtac
tggttgaaggtgtatcaattacctctagcaactcgtactgctcgtggtcgacctatcgtt
aatatcctaccattggatagtgacgagcgtattaccgctattttaccggtacgcgaatat
gaagaagataaatacatcgtcatggcgacagcatcaggtacgattaagaaaacaccattg
acggcgtactcgcgtccacgtgctaatggtattatcgccttgaacttacgtgatgacgac
accttgatcggtgttgatattaccgatggtcatgacgacattatgttgttcagtgatgaa
ggtaaagtggttcgtttcaacgagatggctcgcgatagcgagaccggtgaaatcaaagtt
gatgcagagactggcgaacagattcatgcacttcgtgccatgggtcgtaccgcaacaggt
gttcgtggtatcaaacttgaaggtgaccaaaaagttgtttcactgattattcctcgctcc
gacggtgcggtgttaacggttactgaaaacggctatggtaaacgtaccgcacttgaagaa
tacccagctaagtcgcgtgcgaccaaaggtgtggtatcaatcaaggtgagtgatcgtaat
ggtccggttgttggcgcagttcaagttgatgacaatgacgagatcatgttgatcaccgac
aacggtaccttagttcgtactcgtgttaatgaagtcggcatcatcggccgtaatacgcaa
ggggttcgattaatcagaaccgctgaagatgaaaacgtcgtaggcttacaacgaatcgaa
gaaatcgatgaagacgatgaattgctagaaggcgaagagggtgcaccaacagcagatggt
gacgctcaaccagagccggaagcggagcaggctgaagcggatgacgctgaggcaagcgac
gaataa
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