Thauera humireducens SgZ-1: AC731_003075
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Entry
AC731_003075 CDS
T04211
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03410
Base excision repair
thu03430
Mismatch repair
thu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AC731_003075
03430 Mismatch repair
AC731_003075
03440 Homologous recombination
AC731_003075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_003075
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AC731_003075
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AC731_003075
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AC731_003075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AMO36010
UniProt:
A0A140IE35
LinkDB
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Position
complement(646683..648386)
Genome browser
AA seq
567 aa
AA seq
DB search
MTRIQSRPVSQQALARLADAGLHPLLARLYAARGIARADELDTSLKNLLPPEALTGTQEA
AVLLADAIEAGARMVIVADYDCDGATACAVGMRALRAFGADVHYLVPDRVTLGYGLTPAM
VEIAARLEPDVLITVDNGIASVEGIAAARAHGMATVITDHHLPGDVLPEADVIVNPNQPG
CDFPSKALAGVGAMFYTMLALRAELRERGAFTGGKEPNLADLLDLVALGTVADVVKLDRN
NRILVAQGLARMRAGRLQPGIRALFALAGRDPARASTTDLGFMIGPRLNAAGRLSDMSLG
IECLITDDAGRAMNIAQELDKLNRERRSIEAGMQEEALARLSGFNGEVSAGNRATIALFE
PDWHQGVIGIVAGRIKEKLHRPTIAFARANDGELKGSGRSIPGLHLRDALDLVTKRHPDL
IVRFGGHAMAAGLTIRESELARFDAAFEDVVSELLEPAQLERRIETDGNLEPGYFALDAV
RMLDNEIWGQGFPAPVFDDVFRVERQRVLKDKHLKLELTRGNTRYEAIQFNHAEGAAAQI
HAAYRLSINEYNGVSSVQLMLEHFEAA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatccagtcccgccctgtctcgcagcaagccctcgcccgcctcgccgatgcc
ggcctgcacccgctgctcgcccgcctgtatgccgcacgcggcattgcccgcgccgacgag
ctcgacaccagcctcaagaacctgcttccgcccgaagcgctgaccggcacccaggaggcc
gccgtgctgctcgctgacgccatcgaggccggcgcgcgcatggtgatcgtcgccgactac
gactgtgacggcgccaccgcctgcgcggtgggcatgcgtgcactgcgcgccttcggcgcc
gacgtgcattacctggttccggatcgcgtcacgctcggttacggcctcacgccggcgatg
gtcgagatcgccgcgcggctcgagcctgacgtgctgatcaccgtcgacaacggcatcgcc
agcgtcgaaggcatcgccgctgcgcgcgcgcacggcatggccaccgtcatcaccgaccac
cacctgcccggcgacgtgctgcccgaggccgatgtgatcgtgaatccgaaccagcccggc
tgcgacttcccgagcaaggcgctggctggcgtgggcgcgatgttctacaccatgctcgcg
ctgcgcgccgagttgcgcgaacgcggcgcctttaccgggggcaaggaaccgaacctggcc
gacctgctcgatctggtggcgctgggcaccgtggccgatgtggtcaagctcgaccgcaac
aaccgcatcctggtcgcgcaaggactcgcgcgcatgcgcgccggccgcctgcagccgggc
atccgcgccctgttcgcactggccgggcgcgatccggcacgcgccagcaccacggacctc
ggcttcatgatcggtccgcgcctcaacgcggctggccgtctgtcggacatgagcctgggc
atcgaatgcctgatcaccgacgacgccgggcgcgccatgaacatcgcccaggagctcgac
aagctcaaccgcgagcgccgcagcatcgaggccggcatgcaggaagaagcgctggcgcgc
ctgtccgggttcaatggggaagtgagcgccggcaaccgcgcgaccatcgccctgttcgag
cccgactggcaccagggcgtgatcggcatcgtcgccggccggatcaaggaaaagctgcac
cggcccaccattgccttcgcacgcgcgaacgatggcgagctcaagggctcgggtcgctcg
attccgggcctgcacctgcgcgacgcgctcgatctcgtgaccaagcgccatcccgacctg
atcgtgcgtttcggcggccacgcgatggcagccggactcaccatccgcgaatccgaactc
gcccgcttcgacgctgccttcgaggacgtcgtcagcgaactgctcgaacctgcccaactc
gagcgccgcatcgagaccgacggcaacctggagcccggctacttcgcgctcgacgccgtg
cgcatgctcgacaacgaaatctggggccagggctttccggcaccggtgttcgacgacgtg
tttcgcgtcgaacgccagcgggtgctgaaggacaagcatctcaagctcgaactgacgcgc
ggcaacacccggtacgaggcgatccagttcaaccacgccgaaggcgcagcagcgcagatc
catgccgcctaccgcctgagcatcaacgagtacaacggcgtgtcgagcgtgcagttgatg
ctggagcacttcgaagccgcctga
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