Thauera humireducens SgZ-1: AC731_007415
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Entry
AC731_007415 CDS
T04211
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AC731_007415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thu03019
]
AC731_007415
03009 Ribosome biogenesis [BR:
thu03009
]
AC731_007415
Enzymes [BR:
thu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AC731_007415
Messenger RNA biogenesis [BR:
thu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AC731_007415
Ribosome biogenesis [BR:
thu03009
]
Prokaryotic type
rRNA helicases
AC731_007415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
HEM4
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMO36790
UniProt:
A0A127K4A0
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All DBs
Position
1547904..1549949
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AA seq
681 aa
AA seq
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MTDSARTEPASPEAALRFADLDLPTPLLNALAEVGYETPSPIQAACIPQLLAGRDILGEA
QTGTGKTAAFALPMLARLDLSDTRPQVLVLTPTRELAIQVAEAFAKYAHHLKNFHVLPIY
GGQSMVVQLRQLSRGAQVIVGTPGRVMDHLERESLKLDALKAIVLDEADEMLRMGFIDDV
EWILEHTPAERQTALFSATMPNVIRDVARRHLREPEEIKIRAATATVSKISQRYWLVRGV
DKLDALTRILDAEESFDAAIVFVRTKIATDELADKLAARGYAAAALNGDMTQGLRERVIE
QLKNGALDIVIATDVAARGIDVPRVSHVINYDIPYDTEAYVHRIGRTGRAGREGVAILFV
APRETRMLKMIERATRQPITPIALPSSEEVTNLRVAQFKRQVVDAIGSEDLGFFMGVVND
LVEENELDIHEVAAALTLIAQRERPLQIEQSGRGWDLATAEPGSGGRAPREEHFTTGAPR
ERTPRPNRDEILARRRSFADGALVRYRIEVGRNQGASPKEIVGAIANEGGIEGKFIGQIH
LFDDFSTVELPANLPDDLMGILKRTRVRQMALNIRALSAAEAAATPERRRPPRDEGFAGE
RREGGWQKQPGGERGDKFPRSEKPRGNWERDGKRPAGAPRKDDHPAPRRDARPDSGAHHK
SFSRPANAPYSAGKPRKRRED
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactctgcccgcaccgaacccgccagccccgaggctgccctgcgcttcgccgac
ctcgacctgcccactcccctcctgaatgcgctggccgaagtcggctacgagacgccgtcg
cccatccaggccgcctgcattccgcaattgctggcgggccgcgacatcctcggcgaggcc
cagaccggcaccggcaagacggctgcgtttgcgctgcccatgctggcgcgcctagacctg
tccgacacgcgaccgcaggtgctggtgctcacccccacgcgcgaactcgccatccaggtg
gccgaggccttcgccaagtacgcgcaccacttgaagaatttccacgtcctccccatctat
ggtggccagagcatggtggtgcagctgcgccagctgtcgcgtggcgcccaggtcatcgtc
ggcaccccgggccgggtcatggaccacctcgaacgcgaaagcctgaagctcgacgcactc
aaggccatcgtgctcgacgaggccgacgagatgctgcgcatgggcttcatcgacgacgtc
gagtggattctcgagcacacccccgccgagcgccagacggcgctgttctcggccacgatg
ccgaacgtgatccgcgacgttgcccgccgccatctgcgcgaaccggaagagatcaagatc
cgcgccgccaccgccacggtgtcgaagatcagccagcgctactggctcgtccgcggtgtc
gacaagctcgatgcgctcacccgcatcctcgacgccgaagagagtttcgatgccgccatc
gtcttcgtgcgcaccaagatcgccaccgacgaactcgccgacaagctcgccgcccgcggc
tacgccgccgcggccctcaacggcgacatgacccagggcctgcgcgaacgcgtgatcgag
cagctgaagaacggcgcgctcgacatcgtcatcgccaccgacgttgccgcgcgcggcatc
gacgtgccgcgcgtgtcgcacgtcatcaactacgacatcccctacgacaccgaagcctac
gtgcaccgcatcggccgtaccggccgcgccggccgtgaaggcgtggcgatcctcttcgtc
gcaccgcgcgagacgcgcatgctgaagatgatcgagcgcgccacccgccagccgatcacg
ccgatcgcactgccgagcagcgaggaagtgaccaacctgcgcgtggcgcagttcaagcgc
caggtggtcgacgccatcggcagcgaggatctcggcttcttcatgggcgtcgtcaacgac
ctggtcgaggaaaacgaactcgacatccacgaagtcgcggctgcgctgaccctgattgcc
cagcgcgaacgaccgctgcagatcgagcagtccggccgcggctgggacctcgccaccgcc
gagcccggcagcggcggtcgcgcaccgcgcgaggagcacttcaccaccggcgccccgcgc
gagcgcacgccgcgccccaaccgcgacgagatcctcgcgcgccgccgctcgttcgccgac
ggtgccttggtgcgctatcgcatcgaggtcggtcgcaaccagggtgcgagcccgaaggag
atcgtcggcgccatcgccaacgaaggcggaatcgagggcaagttcatcggccagattcat
ctgttcgacgacttctcgacggtggagctgccggccaacctgcccgatgacctgatgggc
atcctgaagcgcacgcgcgtacgccagatggcgctgaacatccgcgccctgagcgcggcc
gaggccgctgccacgcccgagcgccgccggccgccacgtgacgaaggcttcgcgggcgaa
cggcgcgaaggtggctggcagaagcagcctggcggcgagcggggtgacaagttcccgcgc
agcgaaaagccccgcgggaactgggagcgggacggcaagcgcccggccggtgcaccgcgc
aaggacgaccaccctgcgccccggcgtgacgcacggcccgactcgggtgcgcaccacaag
tcgttctcgcgcccggccaacgcgccctactccgcgggcaagccgcgcaagcgccgcgag
gactga
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