Thauera humireducens SgZ-1: AC731_010580
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Entry
AC731_010580 CDS
T04211
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03030
DNA replication
thu03430
Mismatch repair
thu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AC731_010580 (dnaE)
03430 Mismatch repair
AC731_010580 (dnaE)
03440 Homologous recombination
AC731_010580 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thu03032
]
AC731_010580 (dnaE)
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_010580 (dnaE)
Enzymes [BR:
thu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AC731_010580 (dnaE)
DNA replication proteins [BR:
thu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AC731_010580 (dnaE)
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AC731_010580 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AMO37352
UniProt:
A0A127K5W9
LinkDB
All DBs
Position
complement(2249343..2252858)
Genome browser
AA seq
1171 aa
AA seq
DB search
MIADPNSSSLTPHQPRFVHLRLHSEFSITDGIVQIDQAVAAAADDGMPALGISDLANLFG
TVKFYKTARGKGVKPVVGVDAWIQNEAERDKPHRVLLICKNRVGYGQLCELLTRAYLDNK
YRGRAEMRREWFENGAASELLCLSGAMHGDIGVAIAAGNRELATQLAADWSRLFPDAFYL
EIQRAGHPGTEAYIRHALDIAGELGIPVVATHPVQFLKREDFRAHEARVCIAQGYVLADK
RRPRDFTEEQYLKSQAEMCELFADIPEALENAVEIARRCSLTVQLGKNFLPLFPTPEGMT
LDDFLVQEAKAGLEKRLVQLYPQPEEREKQRPRYEERLKFETDTIIQMGFPGYFLIVADF
IRWGKKNGVPVGPGRGSGAGSLVAYSLDITDLDPLEYALLFERFLNPERVSMPDFDIDFC
QDNRYRVIEYVRERYGKEAVSQIATFGTLASKAVVRDVGRVLDMPYGLCDRLSKLIPIEG
AKPVSLNKAYEMEPQIGEMMKDGNDGEAVQTLWGLAQPLEGLTRGVGMHAGGVLIAPGKL
TDFCPLYIADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELALEYIARMTGSRPD
LMSLGFEDPAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYRPGPLGS
GMVDDFILRKKGQQEIDYFHPDLKACLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRR
AMGKKKPEEMAKHRATIAEGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYH
TAWLKAHHCAAFMAATMSSDLDNTDTVKIFYEDTVANGIAVLPPDVNESDYRFVPVDRKT
IRYGLGAVKGVGEPAVRAILAAREKAGAFRDLFEFCERVDRRMVNRRVIEALIRAGAMDT
LSGHQGLDRAQLMATVALAMEAAEQAAANAMQGGLFDLMPEAAGAAPAFAKIRPWTERER
LKEEKLAIGFFLSGHPFNSFKGEVRRFVRRTLAQLEPSRDITMLAGVVMETRTKMGNRGK
MAFVLLDDGTQPREVMVYSEVLDANRGKIVTDEVLVVEAKVSNDEFSGGLRIIADRLLTL
GEARSRFARALQLRINGEVGAGGGAAATAGKLQTLLEPFREGGCPIRVTYRNAAAEADLP
FGDGWRVRLDDALLESLREWLPPESVEVIYP
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgacccgaattcttcctcccttacgccgcatcagccgcgcttcgtccatctt
cgccttcactccgagttctcgatcaccgacggcatcgtccagatcgaccaagccgtggcg
gccgctgccgatgatggcatgccggcgctcggcatctccgacctcgccaacctttttggc
acggtcaagttctacaagaccgcccgcggcaagggcgtcaagccggtcgtcggtgtcgat
gcctggatccagaacgaagccgagcgcgacaagccccaccgcgtcctgctgatctgcaag
aaccgcgtgggctatggccagctatgcgaactgctgacacgcgcctatctcgacaacaag
taccgcggccgtgccgagatgcggcgcgagtggttcgagaacggcgccgccagtgagctc
ttgtgcctgtcgggcgcgatgcacggcgacatcggcgtggcgattgccgcgggcaatcgc
gagctggcaacacaactcgcagccgactggtcgcggctgtttcccgatgcgttctacctc
gagatccagcgcgcaggccatccgggtaccgaggcgtacatccgtcacgcgctcgatatc
gccggcgaactggggattccggtggtggcgacccaccccgtgcagttcctcaagcgcgag
gacttccgggcgcacgaggcgcgggtgtgcatcgcccagggctatgtgctggccgacaag
cgccggccgcgcgacttcaccgaggagcagtacctcaagagccaggcggagatgtgcgag
ctgttcgccgacatccccgaggcgctcgagaacgcggtcgagatcgcccgccgctgctcg
ctgacggtacagctgggcaagaacttcctgccgctgtttccgacgccggaaggcatgacg
ctggacgacttcctggtgcaggaggccaaggccggcctcgagaaacgtctcgtacaactc
tatccccaacccgaggagcgcgagaagcaacgtcctcgctacgaggaacggctcaagttc
gagaccgacaccatcatccagatgggcttccccggctacttcctgatcgttgccgacttc
atccgctggggcaagaagaacggcgtgccggttggtccgggccgcggctcgggcgccggc
tcgctggtggcctattcgctcgacatcaccgacctcgacccgctggagtacgcgctgctg
ttcgagcgcttcctgaacccggagcgggtgtcgatgcccgacttcgacatcgacttctgc
caggacaaccgttaccgcgtcatcgagtacgtgcgcgagcgttacggcaaggaggcggtg
agccagatcgccaccttcggcacgctggcctccaaggccgtggtgcgcgacgttggccgg
gtgctcgacatgccctatggcctgtgcgaccgcctgtccaagctgatcccgatcgaaggg
gccaagcccgtctcgctgaacaaggcctacgagatggagccgcagatcggcgagatgatg
aaggacggcaacgacggcgaggccgtccagaccctgtggggcctggcgcagccgctcgag
ggcctgacccgcggcgtcggcatgcacgccggcggcgtgctgatcgcgccgggcaagctc
accgacttctgcccgctgtacatcgccgatggcgacgacgccacgccggtgtcgcagttc
gacaaggacgacgtggaagccgtcggcctggtgaagttcgacttcctcggcctgcgcaac
ctcaccatcatcgagctggcgctggaatacatcgcgcgcatgaccggcagccggcccgac
ctgatgagcctgggcttcgaagacccggccgcctaccagatcctgaaggacgccaacacc
acggcgatcttccaggtcgaatcggacggcatgaagaagctgctcaagaagcttgccccc
gaccgcttcgaggacatcatcgcggtgctcgcgctctaccggccgggcccgctcggctcg
ggcatggtggacgacttcatcctgcgcaagaagggccagcaggagatcgactacttccat
cccgacctgaaagcctgcctggagccgacctacggcgtcatcgtgtatcaggaacaggtg
atgcagatctcccagatcatcggaggctacaccctgggcggcgccgacatgctgcggcgc
gcgatgggcaagaagaagcccgaggagatggccaagcaccgcgccaccatcgccgagggc
gccaagcagaagggctacgatccggcgctggccgagcagctcttcgatctgatgaccaag
ttcgcggagtacggcttcaacaagtcgcacaccgccgcctacgcggtcgtcacctaccac
accgcctggctcaaggctcatcactgcgcggccttcatggcggcgacgatgtcgtccgac
ctggacaacaccgataccgtcaagatcttctacgaggacacggtcgccaacggcatcgcg
gtgctgccgccggacgtgaatgaatcggactaccgcttcgtgccggtggaccgcaagacg
atccgctacggcctgggcgcggtgaagggggtgggcgagccggcggtgcgggcgatcctg
gcggcacgcgagaaggcgggggccttccgcgatctgttcgagttctgcgagcgcgtcgac
cggcgcatggttaaccgccgcgtcatcgaggcgctgatccgcgctggcgcgatggacacg
ctgtccggccaccagggcttggaccgcgcccagctgatggccaccgttgcgctggcgatg
gaggcggccgagcaggctgcagcgaatgcgatgcagggcgggttgttcgacctgatgccg
gaagctgcgggcgcagcgcctgcattcgcgaagatccggccctggaccgagcgcgagcgg
ctgaaggaagagaagctcgcgatcggcttcttcctgtcgggccatcctttcaacagcttc
aagggcgaggtgcgccgcttcgtacgccgcacgcttgcgcagctcgagccctcgcgcgac
atcaccatgctggcaggcgtggtcatggagacgcggaccaaaatgggtaaccgcggcaag
atggccttcgtgctgctcgatgacggcacccagccgcgtgaggtgatggtctattccgaa
gtgctggacgccaaccgcggcaagatcgtcaccgacgaggtgctggtggtcgaggccaag
gtcagcaacgacgagttctcggggggcttgcgtatcatcgccgaccgcctgctgacgctg
ggcgaggcgcggagccgttttgcgcgcgcgctgcagctgcgcatcaatggcgaggtcggg
gcgggcggaggcgcggctgcgacagccggcaagctgcagaccctgctcgagcctttccgt
gaaggtggctgcccgatccgggtgacgtatcgcaacgccgcggccgaggccgacctgccc
ttcggcgacggatggcgcgtgcggctggacgacgccttgctggaaagcctgcgcgaatgg
ttgccgcccgagtcggtggaggtgatctacccctga
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