Thauera humireducens SgZ-1: AC731_011630
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Entry
AC731_011630 CDS
T04211
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AC731_011630 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thu03021
]
AC731_011630 (rpoB)
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_011630 (rpoB)
Enzymes [BR:
thu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AC731_011630 (rpoB)
Transcription machinery [BR:
thu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AC731_011630 (rpoB)
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AC731_011630 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
FH2
Motif
Other DBs
NCBI-ProteinID:
AMO37536
UniProt:
A0A127K6E2
LinkDB
All DBs
Position
complement(2471927..2476060)
Genome browser
AA seq
1377 aa
AA seq
DB search
MAYSYTEKKRIRKSFAKRAAVLDAPFLLATQIESFAEFLQAETLPEARRTQGLQAAFSSI
FPISSHSGNARLEFVQYMLGEPAFDVKECQQRGLTFASPLRARVRLVIMDREAPKETIKE
VKEQEVYMGEIPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDYLYFRVDRRRKMPVTILLRAIGMTPEEILATFHDFDNFHLQGEG
AQFELVPDRLRGEVARFDIVTPDGKIIVARDKRITSKHIREIDQAGVKTIGVPDDFVLGR
VIANDIADPETGEVLARANDEITEDLLDKLRLAGVTELRTLYINDLDRGGYISQTLRIDE
TADQWAAKVAIYRMMRPGEPPTEDAVEGLFNGLFYAEERYDLSSVGRMKFNRRAYPEKID
DKAPGWLKRFYERVGAQGEDGPGVLVNEDILAVIGVLVELRNGRGEIDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPISAAIKEFFGSSQLSQFM
DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
AVYARTNRHGFLETPYRKVVDGKVTDQIDFLSAIEEGQYVIAQANAEIDAAGMLAGDLVS
CRHKGEFLLATSDMVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRP
EKPLVGTGIERRVAVDSGTAVQATRGGIVDYVDANRIVVRVNDDETLAGEVGVDIYNMIK
YTRSNQNTNINQRPVVKVGDRIAKGDVVADGASTDLGELALGQNMLVGFMPWNGYNFEDS
ILISERVVADDRFTSIHVEELTVVARDTKLGPEEITRDIASLGEAQLSRLDESGIVYIGA
EVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFT
REGIERDKRAQSIIDDQLRSFKTDLADQMRIVERDAFARIKRMILGQKANGGPKKLAKGA
VLTEEYLDSLEFYHWFDIRMADETLATQLEAVREGLENTRKDFDQAFEIKKKKLTQGDEL
PPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMEDGTPLDIVLNPLG
VPSRMNIGQILETHLGWAAKGLGQQIDKMMQAKASADELRGFMDQIYNGSGKAEDIAGLS
DDEVLDLAGNLKKGVPFATPVFDGAKESEIEQMLELAGLPVRGQVTLFDGRTGEAFERKV
TVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVTGRTKVYENIVKGEHKIDSGMPESFNVLVKEIRSLAIDIDLDRK
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcctacactgaaaagaaacgtatccgcaagagcttcgccaagcgcgcggcc
gtgctcgatgcgcctttcctgctcgccacccagatcgagtcgtttgccgagttcctgcag
gctgaaaccctgccggaagccaggcgcacccagggcctgcaggcggccttttcctcgatt
ttcccgatctcgagtcatagcggcaacgcgcggctcgagttcgtccagtacatgctgggc
gagcctgccttcgacgtgaaggagtgccagcagcgcgggctgacgttcgcgtcgccgctg
cgcgcgcgcgtgcgccttgtgatcatggatcgcgaagcgccgaaggagaccatcaaggag
gtcaaggaacaggaagtctacatgggcgagattccgctcatgaccacgaccggttccttc
gtgatcaacggtaccgagcgcgtcatcgtgtcgcagctgcaccgttcgcccggcgtgttc
ttcgagcacgaccgcggcaagacgcactcgtcgggcaagctgctgttctccgcccgcatc
atcccctaccgcggctcctggctcgacttcgagttcgacccgaaggactacctgtacttc
cgcgtcgatcgccgccggaagatgccggtcacgatcctgttgcgcgccattggcatgacg
ccggaagagatcctcgcgaccttccacgacttcgacaacttccacctgcagggcgagggc
gctcagttcgagctcgttcccgatcgcctgcgtggtgaggtggcgcgtttcgacatcgtc
acccccgatggcaagatcatcgtcgcgcgtgacaagcgcatcacctccaagcatatccgc
gagatcgaccaggccggggtcaagacgatcggcgtgcccgacgacttcgtgctcggtcgc
gtgatcgccaacgacatcgccgatcccgagaccggtgaggtgctggcgcgcgccaacgac
gagatcaccgaggacctgctcgacaagctgcgtctcgccggtgtgaccgaactgcgtacc
ctctacatcaacgacctcgatcgcggtggctacatctcgcagaccctgcgtatcgacgag
accgctgatcagtgggctgccaaggtcgcgatctaccgcatgatgcgtccgggcgagccg
cccaccgaagacgcggtcgaaggtctgttcaacggcctgttctacgccgaggagcgttac
gacctgtcgtccgtgggtcgcatgaagttcaatcgccgcgcctatcccgagaagatcgac
gacaaggcgccgggctggctcaagcgcttctacgagcgcgtcggcgcccagggcgaagac
ggcccgggcgtgctggtcaatgaagacatcctggccgtcatcggcgtgctggtcgagctg
cgcaacggtcgcggcgagatcgacgatattgatcacctcggcaaccgccgcgtgcgttcg
gtgggcgaactcgcggagaaccagttccgcgccggcctggtgcgcgtcgagcgcgcggtc
aaggagcgtctgtcgcaggccgagtcggacaacctgatgccgcacgatctgatcaatgcc
aagccgatctcggccgcgatcaaggagttcttcggctcgagccagctgtcgcagttcatg
gaccagaccaacccgctgtccgagatcacgcacaagcgtcgcgtctcggcgctgggtccg
ggcggtctgacgcgcgagcgtgccggcttcgaggtgcgcgacgtgcacccgacccactac
ggccgcgtgtgcccgatcgagacgccggaaggcccgaacatcggtctgatcaactcgctg
gcggtgtatgcccgcaccaaccgccacggcttcctcgagacgccgtaccgcaaggtggtc
gacggcaaggtcaccgaccagatcgatttcctgtcggcgatcgaggaaggccagtacgtg
atcgcgcaggcgaacgccgagatcgacgccgccggcatgctggcgggcgacctcgtgtcc
tgccgccacaagggtgagttcctgctggcgacctcggacatggtccagtacatggacgtt
gcgccgggccagatcgtatcggtcgctgcctcgctgatcccgttcctcgagcacgacgac
gcgaaccgcgcgctgatgggcgccaacatgcagcgccaggccgtgccctgcctgcgtccg
gagaaaccgctggtcggtaccggcatcgagcgccgtgtggcggtcgactcgggcaccgcc
gtgcaggccacgcgtggcggcatcgtcgactacgtcgatgcgaaccgtatcgtggtgcgg
gtgaacgacgacgagaccctcgcgggtgaagtcggcgtcgacatctacaacatgatcaag
tacacccgctcgaaccagaacaccaacatcaaccagcgtccggtggtgaaggtgggcgat
cgcatcgccaagggcgacgtcgtggccgatggggcctcgaccgacctcggcgagctcgcg
ctgggccagaacatgctggtcggcttcatgccgtggaacggctacaacttcgaagactcg
atcctgatctccgaacgcgtggtcgccgacgatcgcttcacctcgatccacgtcgaggaa
ctgacggtcgttgcccgtgacaccaagctcggacccgaggaaatcacccgcgacatcgca
tcgctgggcgaggcgcagctgtcgcgcctggatgagtcgggcatcgtgtacatcggcgcc
gaggtcgaggccggcgacgtactggtgggcaaggtcacgccgaagggcgagacccagctg
acgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtccgacgtgaaggac
acctcgctgcgcgtaccctcgggcatggtcggcaccgtcatcgacgtgcaggtcttcacc
cgcgaaggcatcgagcgcgacaagcgcgcgcagtcgatcatcgacgaccagctgcgcagc
ttcaagaccgacctcgccgaccagatgcgcatcgtcgaacgcgacgcgttcgcccgtatc
aagcgcatgatcctgggccagaaggccaatggtggtccgaagaagctcgccaagggcgcc
gtgctgaccgaggagtacctcgactcgctcgagttctaccactggttcgacatccgcatg
gccgacgagacgctggcgacccagctcgaagcggtgcgcgagggcctggagaacacccgc
aaggacttcgatcaggctttcgagatcaagaagaagaagctcacccagggcgacgaactg
cccccgggcgtgcagaagatggtcaaggtgtacctggccgtcaagcgtcgcctgcagccg
ggtgacaagatggccggccgtcacggtaacaagggtgtcgtgtcgaagatcgtcccggtc
gaggacatgccctacatggaagacggcacgccgctggacatcgtgctgaacccgctgggc
gttccgtcgcggatgaacatcggccagatcctcgagacgcacctcggctgggcggcgaag
ggcctgggccagcagatcgacaagatgatgcaggccaaggcgtcggccgacgagctgcgc
ggcttcatggaccagatctacaacggcagcggcaaggccgaggacatcgccggcctcagc
gacgacgaagtgctggatctcgcaggcaacctgaaaaagggcgtgcccttcgcgactccg
gtgttcgacggtgccaaggaatccgagatcgagcagatgctcgaattggccggcctgccg
gtccgcggtcaggtcacgctgttcgatggccgtaccggcgaggccttcgagcgcaaggtg
acggtgggctacaagcacgtgctcaagctgcaccacctggtcgatgacaagatgcacgcg
cgttcgaccggcccgtactcgctcgtcacccagcagccgctgggcggcaaggcgcagttc
ggtggccagcgcttcggtgagatggaagtttgggcgctggaggcgtacggtgcggcctac
acgctgcaggaaatgctgacggtcaagtccgatgacgtgaccggccggaccaaggtgtac
gaaaacatcgtcaagggcgagcacaagatcgattccggcatgccggagtccttcaacgtg
ctggtgaaggaaatccgttcgctcgcgatcgacatcgatctcgaccgcaaataa
DBGET
integrated database retrieval system
