Thauera humireducens SgZ-1: AC731_012320
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Entry
AC731_012320 CDS
T04211
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AC731_012320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_012320
Enzymes [BR:
thu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AC731_012320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AC731_012320
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AC731_012320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5817
DUF7573
Zn_ribbon_6
DZR
RNHCP
Zn_ribbon_8
HscB_4_cys
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AMO37659
UniProt:
A0A127K6U7
LinkDB
All DBs
Position
complement(2630336..2631157)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETTCRGVQPHVEGRALTALVVRNARLRLPVPDDLAERLVGRDLRRVSRRAKYL
LFDFGTGSVILHLGMSGSLRVVAAGLPPAAHDHVDLVFGDLALRLRDPRRFGMIVWQAGD
ADAHPLLARLGPEPLSEAFDGAWLHRVTRGLRAPIKHVLMDSHRVVGVGNIYASESLFRA
GIHPLEPAGALGPRRCARLVAAVRDTLTAAIAAGGSTLRDFVGSDGRPGYFQQQYFVYAR
EGESCRHCGTPVQRIVSGQRATYFCPRCQRRRA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgagaccacttgccgcggcgtgcagccccacgtcgaggga
cgggcgctgaccgcgctggtcgtccgcaatgcccgcctgcgcctgccggtgcccgacgac
ctcgccgaacgactcgtcgggcgtgacctgaggcgggtgtcgcggcgcgcgaagtacctg
ctgttcgacttcgggacgggctcggtgatcctgcatctggggatgtcgggtagcctgcgc
gtggtggcggccgggctgccgcctgcggcgcacgaccatgtcgacctcgtgttcggggat
ctggcactgcggctgcgcgatccgcgccgcttcggcatgatcgtgtggcaggcgggtgac
gccgatgcccaccccctgctggcccggctcggccccgagcccctgagcgaggccttcgat
ggtgcgtggctgcatcgcgtcacgcgcgggctgcgtgcgccgatcaagcacgtgctgatg
gacagccacagggtggtcggcgtgggcaacatctatgcgtcggagagcctgttccgtgca
ggcatccaccccctcgagcccgcgggcgcgctcgggccgcggcgctgcgcgcggctcgtg
gccgcggtgcgcgacaccctcaccgcggcgattgccgcaggcggcagcaccttgcgtgac
ttcgtcggcagtgacgggcggccgggttacttccagcagcagtatttcgtctatgcccgc
gagggcgagtcgtgcaggcactgcggcacgcccgtgcagcgcatcgtcagcgggcagcgc
gccacgtacttctgtccccgctgccagcggcggcgagcctga
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