Thauera humireducens SgZ-1: AC731_015555
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Entry
AC731_015555 CDS
T04211
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AC731_015555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_015555
Enzymes [BR:
thu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AC731_015555
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AC731_015555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AMO38229
UniProt:
A0A127K8E9
LinkDB
All DBs
Position
3333240..3337073
Genome browser
AA seq
1277 aa
AA seq
DB search
MSAAPELDVFHCPLDGIRLVEASAGTGKTWNICGLYLRLLLERELPVEALLVVTFTKAAT
AELSGRIRERIAETLRVLEGAAPGADPFVPQLIETVQARGIDAERMTHRLRHALQTFDEA
AIFTIHGFCQRALADTPFAAGLPYELELVEDDSALRLEVVQDFWRREVAGGALSPLLAEA
LLQAKDSPETWAGILSRHMARPCARVLWDESTSRGGDEGADVGAGLAQAEANLTRAYAAA
CGLAGALQAAIGCVNDALGGLNASSYKPDSVAKAARQWADWLAAANPLHPLRGGTDNKLA
LFTTAMLEKRSTAAGRKGGIAPPRHDFFDFAEALLAARGEVEGLLSAARLRLLRRCVEDC
SGELRRRKAERRQISFDDILWNAHQALHSGAQPWLAAALHARYPVALIDEFQDTDPLQFG
IFDRIYRAEGRHGSLFLVGDPKQAIYSFRSADLFTYFAARDRTDARYTLRHNQRSSPALI
EACNRLFGANPAVFMMDRLDYVRVGAGSRPRKPLVDETADDAVPPLQLWRIPRDETLAED
DEGGGARLPRAAALHRAAHASAAEIARLLAAGAQGRVRIGERSLAPSDIAVLLRSHGQGA
RMRRALAAFGVGSVELSQASVFHTDDAEELERVLLAIAEPLRERRVKAALATAAMGRDAA
ALARLAGDEAALLGTLDAFVRWRELWLSRGFGVMLRQWMSDEGVAARLLARPDGERRLTN
LMHLAELLQQDAGTATPEVLLRMLATRRRDAAGGEATQLRLESDRNLVQIVTIHRSKGLE
YGVVFCPFLFDGYARSGGEGPMRAWHDDDGELVLDYREAAAKDEAVKARLRRERQAEDLR
LIYVALTRAVHRCYLVVGSYATLSFGRVSHTEAGRSLLNWMAAGAGMDAEAWAEHKPNPL
GTDACWRALVASSALDGRPTMQLTDLPDGQGDALAPPDSAGQRPRAQRPPALPAGWRIGS
FSALISGAAHEQAALDHDANALDAGELAVLSGLAGEADGAAPATPADDDILRFPRGPVAG
DCMHAVFEAVDFTDPAGWDAAVAAALAAHPQRLSADRRPRGRPAAVAPQDETALLSRMLR
TLLADVVATPLLADAGGTGLRLDTVPPARRLVELGFHLPAPRLTAPQLNAWLAAQGYRMP
RLAFHELDGYLKGFIDLVFEHDGRFWVLDWKSNHLGDRPQDYAPARLEAAMQAHGYHLQH
LIYSVALHRHLGRSLPGYDFDRHFGGVLYLFVRGVRPGWQVDGRPAGVYHHRCPRATLEA
LDALLAGTADASALESA
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgctcccgaactcgacgtcttccattgcccgctcgacggcatccgcctggtc
gaggcctcggccggcaccggcaagacctggaacatctgcggcctctacctgcgcctgctg
ctcgaacgcgagctgccggtcgaggcgctgctggtcgtcaccttcaccaaggcggcgacc
gccgagttgtccgggcgcatccgcgagcgcatcgccgagaccctgcgcgtgctcgaaggc
gcggcgccgggcgcggaccccttcgtgccgcagctgatcgagaccgtgcaggcgcgcggc
atcgacgccgagcgcatgacgcaccgcctgcgccatgcgctgcagaccttcgacgaggcg
gcgatcttcaccatccacggcttctgccagcgcgcactggccgacacgcccttcgccgcc
ggcctgccctacgaactcgaactggtcgaggacgacagcgcgctgcggctggaagtggtg
caggacttctggcggcgcgaggtggccggcggcgcgctgtcgcccttgctggcggaagcg
ctgctgcaggcaaaggacagccccgagacctgggccggcatcctttcgcggcacatggcc
cggccctgtgcgcgtgtcctgtgggacgagagcacgagccggggtggcgacgagggcgcg
gacgtcggcgccggactggcgcaggccgaggcgaacctgacccgggcctatgccgccgcc
tgcgggctggccggggcgttgcaggcggcgatcggctgcgtcaacgatgccctcggtggg
ctcaacgccagcagctacaagcccgattcggtggcgaaggcagcacgccagtgggccgac
tggctggccgccgccaacccgctccatcccctgcggggcggcaccgacaacaagctcgcg
ctgttcaccaccgcaatgctggagaagcgcagcaccgcggccgggcgcaagggcggcatc
gcgccgccgcgccacgacttcttcgatttcgccgaggccttgctggcggcgcggggcgag
gtcgagggcctgctgtccgccgcgcgcctgcgcctgctgcgccgctgcgtcgaggactgc
agcggcgagctgcgccggcgcaaggccgaacggcgccagatctccttcgacgacatcctc
tggaacgcgcaccaggcgctgcattcgggtgcccagccctggctcgcggccgccctgcac
gcgcgctacccggtggccctgatcgacgagttccaggacaccgacccgctgcagttcggc
atcttcgaccgcatctaccgcgccgaagggcgccacggcagcctgttcctggtcggcgac
cccaagcaggcgatctacagcttccgcagcgccgacctgttcacctacttcgcggcgcgc
gaccgcaccgacgcgcgctacacgctgcgccacaaccagcgttcctcgccggcgctgatc
gaagcctgcaaccgtctgttcggcgccaacccggcggtgttcatgatggaccggctggac
tacgtgcgcgtgggcgccggcagccgcccgcgcaagccgctggtcgatgagacggcggac
gatgcggtgccgccgctgcagctgtggcgcatcccgcgcgacgagacgctggccgaggac
gacgagggcggcggcgcccgcctgccgcgcgcggcggccctgcatcgcgcggcgcacgcc
agcgccgccgagatcgcgcgcctgctggcggccggagcgcagggcagggtgcgcatcggc
gagcggtcgctggcgccgtccgacatcgcggtgctgctgcgcagccacggccagggcgcg
cgcatgcgccgcgcgctggcggccttcggcgtcggcagcgtcgagctgtcgcaggccagc
gtgttccataccgacgatgccgaggaactcgagcgcgtgctgctggcgattgccgagccg
ctgcgcgagcgccgtgtcaaggcggcgctcgccactgcggcgatgggccgcgatgccgcg
gcgctggcccgcctggccggcgacgaggccgcgctgctcggcacgctggacgccttcgtg
cgttggcgcgagctgtggctgtcgcgcggcttcggcgtgatgctgcgccaatggatgagc
gacgagggcgtcgccgcccgcctgctcgcgcggccggacggcgaacgccgcctcaccaac
ctcatgcacctggccgagctgctgcagcaggacgccggcaccgccacgccggaggtgctg
ctgcgcatgctggccacccgccggcgtgatgcggccggcggcgaggccacccagttgcgg
ctcgaatccgaccgcaacctggtgcagatcgtcaccatccaccgctcgaaggggctggag
tacggcgtcgtgttctgccccttcctgttcgacggctacgcccgcagcggtggcgagggg
ccgatgcgcgcctggcacgacgacgacggcgaactggtgctcgattaccgcgaagcggcg
gcgaaggacgaggcggtcaaggcccgcctgcgccgcgagcgccaggccgaggacctgcgc
ctgatctacgtcgcgctgacgcgtgcggtgcatcgttgctacctcgtcgtcggcagctac
gccacgctgagcttcggtcgtgtgagccacaccgaggccggccgcagcctgctcaactgg
atggcggccggcgccggcatggatgccgaggcctgggccgagcacaagcccaatccgctc
ggcaccgatgcctgctggcgtgcgctggtcgcgtcgagcgcgctcgacggccggccgacg
atgcagctcaccgacctgcctgatggccagggcgacgcgctggcgccccccgactccgcg
ggccagcgcccgcgggcccagcgtccgccagcactgccggcgggctggcgcatcggcagc
ttcagcgcgctgatctcgggcgcggcgcacgaacaggccgcgctggaccatgacgcgaac
gcactcgacgccggtgagctggccgtgctgagcggactcgcgggagaggcagacggcgcc
gcgcccgcgaccccggcggacgacgacatcctgcgcttcccgcgcggtccggtggcgggc
gattgcatgcacgcggtgttcgaggccgtcgacttcaccgatccggccggctgggatgcc
gccgtcgccgccgcgctggcggcccatccgcaacgcctgtccgccgaccgccggccgcgc
ggacgcccggcggctgtcgcgccacaggacgagaccgcacttctgtcgcgcatgctgcgc
acgctgctggcggacgtcgtggccacgccgctgctggcggatgccggcggtacagggctg
cggctcgataccgtgccgcccgcgcgccgcctggtcgaactgggctttcacctgccggcg
ccacgcctcaccgcgccgcagctcaacgcctggcttgcggcgcagggctaccgcatgccg
cggctcgccttccacgagctcgacggctacctgaagggtttcatcgacctcgtgttcgag
cacgacggccgcttctgggtgctggactggaagtccaaccatctcggcgaccggccgcag
gactacgcgccggcgcgcctcgaagccgcgatgcaggcgcacggctaccacctgcagcac
ctgatctacagcgtggcgctgcatcgccatctcggccgcagcctgccgggctacgacttc
gaccgccacttcggcggcgtgctctacctgttcgtgcgcggcgtgcggccgggctggcag
gtcgacggccggccggccggtgtctatcaccaccgctgcccgcgtgccacgctcgaggcg
ctcgacgcgctgctcgccggtaccgccgacgcgtccgcgctggagtccgcatga
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