Thauera humireducens SgZ-1: AC731_018260
Help
Entry
AC731_018260 CDS
T04211
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thu
Thauera humireducens SgZ-1
Pathway
thu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AC731_018260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thu03019
]
AC731_018260
03400 DNA repair and recombination proteins [BR:
thu03400
]
AC731_018260
Enzymes [BR:
thu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AC731_018260
Messenger RNA biogenesis [BR:
thu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AC731_018260
DNA repair and recombination proteins [BR:
thu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AC731_018260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Helicase_Sgs1
PCDO_beta_N
Motif
Other DBs
NCBI-ProteinID:
AMO38719
UniProt:
A0A127K9T4
LinkDB
All DBs
Position
complement(3938863..3940722)
Genome browser
AA seq
619 aa
AA seq
DB search
MDTAFASPPYPSSAPRTPQSALHILQHVFGYPAFRGEQQAIVEHVAAGGDALVLMPTGGG
KSLCYQIPALMRDGTAIVVSPLIALMQDQVSALVEAGVRAAFLNSSLDMDAARAVERALW
DGELDLLYVAPERLMTPRFLDQLDHLRDTHRLALFAIDEAHCVSQWGHDFRPEYLQLSIL
PERYPSIPRIALTATADRQTREEIAERLNLTHARRFVSSFDRPNIRYTIVDKDDPRRQLL
NFIREECPAQAGIVYCLSRRKVEETAAWLQEQGLNALPYHAGMTQEMRAEHQTRFLREDG
LIMVATIAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAQAWMAWGAQDVVQ
QRRMIDESEAGEEFKRLARNRLDVLVGLVEATTCRRQHLLAYFGEESGPCGNCDNCLNPP
QTWDATEAARKALSCVYRTGQRYGAGHLIDVLRGELTEKVIERQHQDITTFGIGSELDEK
RWRTIFRQLVAREFVAVDHERYNALRLTDAARPLLRGEAEFHLRLERERGKSRGKRRNAP
LDIPDGIPTTLFDRLRAWRFATAKERNVPAYVVFQDATLREIAIARPQTLSELASISGIG
DRKLEAYGEAILALTNATN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgttcgcatcgcccccctaccccagctccgcccctcgtacgccgcagtcg
gcgcttcacatcctccagcatgtcttcggctaccccgccttccgcggcgagcagcaggcc
atcgtcgagcacgtagcggcgggcggcgatgcgctggtactgatgccgaccggcggcggc
aagtcgctgtgctaccagatcccggcgctgatgcgcgacggcacggccatcgtcgtgtca
ccgctgatcgcgctgatgcaggaccaggtcagcgcactggtcgaggccggcgtgcgcgcg
gccttcctgaactcgagcctcgacatggacgccgcgcgcgccgtcgagcgtgcgctgtgg
gacggcgagctcgacctgctctacgtcgcacccgagcggctgatgacaccgcgcttcctc
gaccagctcgatcacctgcgcgacacccaccggctcgcgctgttcgcgatcgacgaagcg
cactgcgtgtcgcagtggggccacgatttccgcccggagtacctgcagctttccatcctg
cccgagcgctatccgtccattccgcgcattgcgctcaccgccaccgccgaccgccagacc
cgcgaggagatcgccgagcgcctgaatctgacccacgcgcgccgcttcgtctccagcttc
gaccgccccaacatccgctacaccatcgtcgacaaggacgatccgcgccgccagctgctg
aatttcatccgtgaggaatgccccgcgcaggccggcatcgtgtattgcctgtcgcgtcgc
aaggtggaggagaccgccgcctggctgcaggaacagggcctcaacgccctgccctaccac
gccggcatgacgcaggaaatgcgcgccgagcaccagacccgcttcctgcgcgaggacggg
ctgatcatggtggcgacgatcgccttcggcatgggcatcgacaagcccgacgtgcgcttc
gtcgcccacctcgacctgccgcgctcgatcgagggctactaccaggaaaccggccgcgcc
ggccgtgacggcctgcccgcgcaggcctggatggcctggggggcgcaggacgtggtgcaa
cagcggcgcatgatcgacgaatcggaggcgggcgaggagttcaagcgcctggcgcgcaac
cgcctcgacgtgctggtcggcctggtcgaggccaccacctgccgccgccagcacctcctg
gcctacttcggcgaggaatccggcccctgcggcaactgcgacaactgcctcaacccgccg
cagacctgggatgccaccgaggccgcgcgcaaggccttgagctgtgtctatcgcaccggc
cagcgctacggtgccggccacctgatcgacgtgctgcgcggcgagctcaccgagaaggtc
atcgagcgccagcaccaggacatcaccaccttcggcatcggcagcgagctcgacgagaag
cgctggcgcacgatcttccgccagctggtggcgcgcgagttcgtcgcggtggaccacgag
cgctacaacgccctgcgcctcaccgacgccgcccgcccgttgctgcgcggcgaagccgag
ttccacctgcgcctcgagcgcgaacgcggcaagagtcgcggcaagcggcgcaacgccccg
ctcgacatccccgacggcatccccaccacgctgttcgaccgcctgcgcgcgtggcgcttc
gccaccgcgaaggagcgcaacgtgccggcctacgtcgttttccaggacgccacgctgcgc
gagatcgccatcgcccgtccgcagacgctatcggaactcgcatccatcagcggcatcggc
gaccgcaagctcgaagcctacggcgaggccatcctggcgctgacgaacgccacgaactga
DBGET
integrated database retrieval system
