Thermoflexus hugenholtzii: KNN16_02005
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Entry
KNN16_02005 CDS
T07254
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
thug
Thermoflexus hugenholtzii
Pathway
thug00470
D-Amino acid metabolism
thug00550
Peptidoglycan biosynthesis
thug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KNN16_02005 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KNN16_02005 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thug01011
]
KNN16_02005 (murD)
Enzymes [BR:
thug01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KNN16_02005 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
thug01011
]
Precursor biosynthesis
Amino acid ligase
KNN16_02005 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
F420_oxidored
Shikimate_DH
TrkA_N
Sacchrp_dh_NADP
KARI_N
NAD_binding_2
AlaDh_PNT_C
XdhC_C
MurD_N
ApbA
NAD_binding_7
NAD_Gly3P_dh_N
FMO-like
Motif
Other DBs
NCBI-ProteinID:
QWK11062
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All DBs
Position
418351..419727
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AA seq
458 aa
AA seq
DB search
MRELKGARVVILGLGRQGTALARWLVRQGAEVTVSDRQPAERLGRFLQALEGLPVRYVLG
DHPLSLLEGCDLLCLSGGVPLDIPIVQEAVRRGIPLANDAQLFLERCRGWTAGITGTSGK
TTTTALVGAMCQAAGFRTWVGGNIGNPLIEFVEEIGPEDRVILELSSFQLEIMTVSPRVA
AVLNIAPNHLDRHKTMEAYIAAKQRILDFQDVEDVAVLGYDDPNARSLAAAVRGRLRFFS
REREVARGAFLREGTLFLRLGSEAWPICRVEEVRLRGRHNLWNVLAAAAVAGSLGADIGA
IREAVLTFSGVPHRLERVREVRGVLYVNDSIATTPERVRVALEAFEEPIVLLAGGRDKGL
PWEETAEVIARRVRVLIAFGELGDRIVEAARAARARVDGVVLEHLERVATLEEAVARAAG
LARPGEVVLLSPGGTSFDAYRDFEERGMHFRQLVEALS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagctcaagggcgcgcgggtggtcatcctggggctgggccggcagggcacggcc
ctggcccgctggctggtgcggcagggcgccgaggtcacggtgagcgatcggcagcccgcc
gagcgcctggggaggttcctccaggccctggagggtctgccggtgcgttatgtgctgggg
gaccatcccctctctctgctggagggctgcgacctcctctgtctgagcgggggagtccct
ctggacatccccatcgtccaggaggccgtccggcgggggatccccctggccaacgacgcc
cagctgtttctggagcggtgccgggggtggacggcggggatcaccggcacctcggggaag
acgacgacgactgccctggtgggggcgatgtgccaggcggcgggcttccgcacctgggtg
ggcggcaacatcggcaatcccctcatcgagttcgtggaggagatcggtccggaggaccgc
gtgatcctggagctgtccagcttccagctggagatcatgacggtcagcccgcgggtggcg
gcggtgctgaacatcgcgcccaaccatctggaccgtcacaagaccatggaagcttacatc
gcggccaagcagcgcatcctggacttccaggacgttgaggacgtggcggttctggggtat
gacgacccgaacgcccggtccctggcggcggcggtgcgggggcggctgcggttcttcagc
cgcgagcgggaggtggcgcggggagcgttcctgcgggagggaaccctcttcttgcgcttg
ggctccgaggcctggccgatctgtcgcgtggaggaggtgcgtttgcggggccgtcataat
ctgtggaacgtcctggcggcggcggccgtggcgggcagcctgggcgcggacatcggcgcc
atccgggaggccgtcctcacgttctccggggtgccgcaccggctggagcgggtgcgggag
gtgcggggcgtgctctatgtgaacgactcgatcgccaccacgccggagcgggttcgggtg
gccctggaggcctttgaggagcccatcgtgctgctggcaggcgggcgggataaaggtctc
ccctgggaggagacggcggaggtcatcgcccgccgggttcgcgtgctgatcgccttcggg
gagctgggggatcgcatcgtggaggccgcccgggcggcccgcgcccgggtggacggggtg
gttctggagcatctcgagcgggtggccaccctggaggaggcggtggcccgggcggccggg
ctggcccggccgggagaggtagtgctcctctcccccgggggaaccagcttcgacgcctat
cgggatttcgaggagcgcggcatgcatttccgtcagctggtggaggcgctgtcatga
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