Thermoflexus hugenholtzii: KNN16_03960
Help
Entry
KNN16_03960 CDS
T07254
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thug03000
]
KNN16_03960
Transcription factors [BR:
thug03000
]
Prokaryotic type
Helix-turn-helix
LacI family
KNN16_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_3
Peripla_BP_6
HTH_10
HTH_38
MarR_2
HTH_23
HTH_Tnp_ISL3
HTH_IclR
TetR_N
HTH_24
HTH_AraC
HTH_11
HTH_26
MarR
HTH_AsnC-type
HTH_28
HTH_6
Sigma54_DBD
HTH_Crp_2
HTH_50
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QWK11441
LinkDB
All DBs
Position
complement(860709..861779)
Genome browser
AA seq
356 aa
AA seq
DB search
MGRRASRRVSIKDIARKAGVSHSTVSRALRGSPLVNPRTAERIRRLAARMGYVPNAAARS
LATARTGIVGLVITTLADPFLAEIVRGVEEVALEAGYRLFLATSNADPERELAAVRALAE
SRVEGVIVASSRVGELYLPHLEALGVPIVLINNQREEPFIYSVASDSYQGAVQAISYLVE
LGHTRIAYIAGPPTARSNRERLAGYREAMARAGLPLDPAWIAEGNGRPEGGEWGMRRLLE
APRRPTAVFCYNDMTAIGALRAARAAGLRVPDDLSIIGFDDILFAAYTEPPLTTVAQPKY
EMGRTAMSMLLRLLQGERTPTHLRLPCRLVERASCGPPPEERMDLLPLPLTERRLP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtcgcgcctcccgtcgggtctcgatcaaggacatcgcccggaaggcgggcgtc
tcccactccacggtctcccgggcgttgcggggaagccccctggtcaacccccgcacggcg
gagcggatccgccggctggcggcgcggatggggtatgtccccaacgccgccgcccgcagc
ctggccaccgctcgcaccggcatcgtcggcctggtgatcaccaccctggccgatcccttc
ctggcggagattgtccgcggcgtggaggaggtcgccctggaggccggctatcgcctgttc
ctggccacctccaacgcggaccctgagcgggagctggcggcggtgcgggccctggccgag
agccgggtggaaggggtgatcgtggcctcctcccgcgtcggcgagctctacctcccgcac
ctggaagccctgggcgtccccatcgtgctgatcaacaaccagcgggaggagcccttcatc
tactcggtggcttcggacagctatcagggggcggtgcaggcgatttcttacctggtggag
ctgggccacacccgcatcgcctacatcgccggcccgcccaccgcccgctcgaaccgggag
cgcctggccggctaccgggaggcgatggcccgggccgggctccccctggatcctgcctgg
atcgccgaggggaacggccggccggagggcggggaatgggggatgcgccgcctgctggag
gccccgcgccggcccacggcggtgttctgctacaacgacatgaccgccatcggggccctg
cgggccgcccgggcggccggcctgcgggtccccgacgatctctcaatcatcggcttcgat
gacatcctcttcgccgcctacacggagccccccttgaccaccgtcgcccagcccaagtat
gagatggggcggaccgcgatgagcatgttgctgcgcctgctgcagggggaacgaacgccg
acgcatctccggctgccctgccggctggtggagcgcgcctcatgcggcccgcccccggag
gaaaggatggaccttctccccttacccctcaccgaaaggaggttgccatga
DBGET
integrated database retrieval system
