Thermoflexus hugenholtzii: KNN16_06430
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Entry
KNN16_06430 CDS
T07254
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thug03000
]
KNN16_06430
Transcription factors [BR:
thug03000
]
Prokaryotic type
Helix-turn-helix
Other families
KNN16_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
HTH_50
AAA_16
Mg_chelatase
AAA_5
PAS_8
GAF
PAS_4
IclR
AAA
HTH_23
PAS_9
HTH_30
AAA_22
HTH_Tnp_ISL3
Xre-like-HTH
MLTR_LBD
HTH_24
HTH_28
HTH_AsnC-type
DUF815
MCM
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QWK11924
LinkDB
All DBs
Position
1408672..1410681
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AA seq
669 aa
AA seq
DB search
MQPWAYPVDLPRIRSWWQRFVERRELNPALDPLVAASWARCAPRMNPHAPPALPCLDEGT
LERVRLTLFDLIATARPLMEDLHQFTEGSGLAIALFDPAACVLDVLGDPGIVRAAEAVGL
RPGVYWSEGHVGTNAFALALLERTPAQVVGAEHFVALYHDWVTTAAPVYGLDGQPLGAIG
VMAPAERAQPDTLGMVMAAARAIENQIQAAANLQESHQHLAELQAILEAIDQVVMVLNTR
GEIVRLNRTAARVLGLDPSGILGRPLSSHIQLPPALQNALMDPQVHLETEATLLIDGAPL
EGWLTLHAVAEGRHHLGCVLTFRRSEQIHRMVVRLVGAQALMTLADIPGRSRAIQQVRQQ
ARAAARTSLPVLLHGEPGTGKGVLARAIHNASTRASGPFIAVSCRAIPRELLAMELLGVE
GGTFRNGPSEGRPGKFELAHGGTLYLDEIEALPLELQAAIRRILETGEVMRLGGLRPIPV
DVRLIASSSAPLEQLVAEGHFRADLYHLLASMAIHIPPLRERPEDIPLIAEAVFRRLRRG
SGRTYRLTEAALQQMKAYSWPGNVRELEHVLERAAALSEDGWIDVIHLPERIVGGTDPER
PPDSVRPVEELEREAILRAAIRYRGRVGAMAAALGLSRTTLWRRLKRYGIDPAAFRDRKE
KIQRSPVHP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccctgggcgtatccggtggacctccctcggatccgatcctggtggcaacggttc
gtggagcgccgggagctgaacccggccctggacccgctggtggcggcctcgtgggcgcga
tgcgcccctcgcatgaacccccacgcccccccagccctcccctgtctggatgagggaacc
ctggagcgggtgcggctcacccttttcgatctgatcgccaccgcccgaccgctgatggag
gacctccatcagttcaccgagggctcggggctggccatcgccctcttcgaccccgccgca
tgcgtgctggacgtcctgggggacccggggatcgtccgtgcggcggaggcggtggggcta
cggcccggggtttactggagcgagggccacgtgggcaccaacgccttcgccctcgctctc
ctggagcgcacccctgcacaggtcgtcggagccgaacacttcgttgccctctaccacgac
tgggtgaccacggccgctcctgtttacggcctggacggtcagcccctgggggcgatcggc
gtgatggcgccggcggaacgcgcccagccggacacgctggggatggtgatggccgccgcc
cgggccatcgaaaaccagatccaggccgcggcgaaccttcaggagagccatcagcatctc
gccgagctccaggccatcctggaagccatcgatcaggtggtgatggtcctgaacacccgg
ggggagatcgtccgcctcaaccgcacggcggcccgcgtgctgggcctggatccctccggg
atcctgggacgcccgctgagcagccacatccagctcccccctgccctccagaacgccctc
atggacccccaggtccacctggagaccgaggccacgctgctcatcgatggggcacccctg
gaaggctggctgaccctccacgccgttgcggaaggccggcatcatctggggtgtgtgctc
accttccgccggagcgagcagatccaccgcatggtcgtccgactggtgggggcgcaggcg
ctgatgaccctggccgacatccccggccgttcccgggccatccagcaggtccgccagcaa
gcgcgggcggccgcgcgcaccagcctcccggtcctcctgcacggggagccggggaccggc
aagggggtgctcgcccgagccatccacaacgccagcacccgggccagcgggcctttcatc
gccgtctcatgtcgggccatcccgcgggagctgctggcgatggaactgctgggcgtggag
ggcgggacttttcggaacgggccgtcggagggacggccggggaagttcgagctggcccac
ggcggaaccctctatctggacgagatcgaggcgctgccgctggagctgcaggccgccatc
cggcgcatcctggagacgggggaggtgatgcgcttgggcggcctgcgccccatcccggtg
gacgtgcgtctgatcgcctcctcttcggctcccctggagcagctggtggcggaagggcac
ttccgggccgatctctatcacctcctcgccagcatggccattcacatcccgcccctgcgg
gagcggccggaggacatcccgctcatcgcggaggcggtgttccgccgcctgcgccgcgga
tccgggcgaacgtatcggctcaccgaagccgccctgcaacagatgaaagcctactcgtgg
ccggggaacgtgcgggagctggagcacgtcctggagcgggctgcggcgttgagcgaggac
ggatggatcgacgtcatccacctcccggagcggatcgtgggcggaacggacccggagcgc
ccgccggattccgtccggccggtggaggagctggagcgggaggccatcctgcgggctgcg
atccggtatcgaggacgggtgggggcgatggcggccgccctgggcctcagccgcaccacc
ctgtggcgccgcctgaagcgctacggcatcgacccggccgctttccgggaccgcaaggag
aagatccagcgctcccccgtccacccgtaa
DBGET
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