Thermoflexus hugenholtzii: KNN16_07475
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Entry
KNN16_07475 CDS
T07254
Name
(GenBank) GAF domain-containing protein
Organism
thug
Thermoflexus hugenholtzii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
GAF
GAF_3
PAS_4
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
QWK12126
LinkDB
All DBs
Position
complement(1614606..1619228)
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AA seq
1540 aa
AA seq
DB search
MKARGARSYDLVLRVDLHAGWLYPGRSAPAGWISGWTPRRRLRVEETILRLSPTWSVLEE
TARTGEPREGYLWLAPMALPCRFVATKGRSRSALRLRLDPLIPPDRLARWEELGEPLYVL
DLEGRILWANAAASHFWQLPRSQFLERPLWEWASLPQRQALAEAWAQVLREGLPVTWEVV
LGPEGERGQARWLATPIPGGGLIRQTSPGAEERLHRELSQSLGMLAELSAELHDSRSLLA
RALHLLMEMWKADLGAAYRVQGRRMKLVIGFGVGEAFPARFDQLEMDEPTYAAFRAHRYA
WYIEDTRTAILAPITREVVESLGVRTLVMLPLLHQGETIGLLAFGYRWPRPAHPLERDLL
TLLSHQIAMLLVMAERLRVTGIERDRYQQALAQVAEISHAVAGLSKLEPELPRLIQEALG
RLVEGLGFAGGWLDLQDGEGQGRYSHGLAPEVVEEWMRALPPQTIDAVLREGQARTIPLP
SGTLILAPLRAREQTIGLLGLSASGSGGWLASEPRLILALADQLGAMLEAARITLQERRR
VLRMGRLSRGMAALAAETEPEGILSRLAAVARELVEARRAEVWVWSATGGHRARLAASDP
PSDPARPPGAMRAVLEGAGAEPQAIVLDGEPAWRIPMRYGERSLGVLLLFPEPGRDLPDE
EREALGLLAFHAAILFQNAALYHEGQRRLRDLGALVVGAALAASTLRTQDVLWQAARHLA
GVLQVTNCSISLLDPQGESLVVQADYTPPERQAEDPSLPEVGRRYPLAQYPATARLLQGG
EFMVIRMDDPEADPHEKAWMREFGYQTCLMLPLWVRGRAIGLIELSEARLRTFTEEEIQL
ARALADQVSVALANTMLYEAEQRRAGLLEALSRITRPLTGALRIPEVFETAARQIVAEMG
ICDGAVLFRVSADRAHVEVAASAGLLSEYLPAGDLRPMGGVLAWSIENDAIVRIMDTRQD
ERYQPLVPEEMDPVRSLAVIPLHLEGIVVGALVLFSVHPETFLPEDEPIFQSLADHIGLA
LHNARLYEDSQQRIAELTTLQEVAAQVTSTLDLHHVLETVARRLLEHTGADRIYIHLRDE
AGERWRGGMTLAREGELRWEVPSPRPGGVTETVFRTGHPLIIPDATVHPLFQDAEARTWG
VGAVAAFPLRHAGRPIGTLHVVFGEPRLFRADELRWLGTVVDQVAVAIANAQLYEAARQR
LAELEILRRASEIAVRSMDFETLVEQTLKLLQEVPAFRYVALFLTDPLDPHLLIRYRTGE
RPEEAQRMLRLRLGEGVVGRAGATRAPVCVPDVQADAGYLPAIPETRAELAVPLLAGDRL
VGVLDVQSPEPGAFREEHIRLLSALAGQLAIALENARLFQTVRRRLNELTILYEVITAAA
VTLDPDRVVRQALAAIQRTLGFEAMECLLLEEETGTLKSIGHYGFSEQALRVPLTVKQGI
CGRVARTGMPALVPDVRQDPDYIEAEPSTRSELTVPLKIGERVIGVLNAESPRGEPAAQR
LQRGGSAPDDRPGRPSRGAAGERPPPSRDRPAPAGGDHPV
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcgaggggcacgttcctatgatctggttctccgcgtggatctgcatgccggc
tggctttaccccggcagatccgcccctgccggatggatctccggatggacccctcgtcgg
cggctgcgggtggaggagaccatcctccggctttcgcctacatggtctgtcctggaggag
accgcccgcacgggcgagccgcgggagggctatctctggctggcgccgatggcgcttccg
tgccgtttcgtggccacgaagggacgctcccgaagcgcgcttcgtcttcggctggacccg
ttgatccctccggaccgcctcgcccgctgggaggagctcggcgagcccctctacgtgctg
gacctcgagggccggatcctctgggcgaacgccgcggcctcccatttctggcagctcccc
cgatcccagttcctggagcgcccgctctgggagtgggcaagccttcctcagcgtcaggcc
ctggcggaggcctgggcccaggtcctccgggagggcctcccggtgacctgggaggtggtg
ctggggccggagggggagcgcgggcaggctcgctggctggccactccgatccccggcggc
ggcctgatccggcagacgagccccggcgcggaggaacgcctccatcgggagctctcccag
agcctgggaatgctggcggagctgagcgcggagctccacgactcccggtcgctgctcgcc
cgcgccctgcatctgctgatggagatgtggaaggcggacctgggggcggcttatcgggtg
cagggccgtcggatgaagctggtgatcggcttcggcgtgggcgaggccttcccggctcgt
ttcgaccagctggagatggatgagccgacctacgccgccttccgggcgcatcgctacgcc
tggtatatcgaagatacccgcaccgcgatcctcgcgccgatcacccgggaggtggtggag
agcctgggggttcgcaccctggtgatgctccccctgctccatcaaggggagaccatcggg
ctgctggccttcggctatcgctggccccgacccgctcatccgctggagcgggacctgctg
acgctcctcagccatcagatcgccatgctcctggtgatggccgagcgcctgcgcgtcacc
ggcatcgagcgggaccgctaccagcaagccctcgcccaggttgctgagatcagccacgcg
gtggccggcctctcgaagctcgaaccggagttgccccggttgatccaggaggccctgggc
cgtctcgtcgaaggcctggggttcgcaggcggatggctggatctgcaggatggggaagga
cagggccgctacagccacggcttggccccggaggtcgttgaggaatggatgcgggcgctc
ccgccgcagacgatcgatgcggtcctccgggagggtcaggctcggacgattcccttgccg
tccggcactctgatcctggcccccctccgggcccgggagcagaccatcggcctactgggc
ctgagcgcctcgggctcgggcggctggctcgcctccgagccccggctgatcctggccctt
gccgaccagctgggcgcgatgctggaggccgcccggatcaccctgcaggaacgccggcgg
gttctgcggatgggccggctgagtcgggggatggcggccctcgccgcggagacggagcct
gaggggatcctgagccggctggcagcggtcgcccgggagctcgtggaggcccgacgcgcc
gaggtctgggtgtggagcgccacaggaggccatcgagcccggctggccgcctcggatccc
ccttccgatccagcccgccctccgggggcgatgcgcgcggttctggaaggggcaggggcg
gaaccccaggctatcgtcctggatggggagcccgcctggcggatccccatgcgctatggc
gagcgatccctgggggttctcctcctcttcccggaacccgggcgggatcttccggatgag
gagcgggaagccctcggcttgctggctttccacgcagccatcctctttcagaacgctgca
ctgtatcacgagggccagcggcggctgcgagatctgggagccctggtggtgggcgccgcc
ctggccgcctccaccctgcgcactcaggatgtcctctggcaggccgctcgccatctcgcc
ggcgtgctccaggtgaccaattgctcgatctccctcctggatccccagggggagtccctg
gtggttcaggcggattacacgcccccggagcgacaggcggaggatccctctctgccggag
gtcggccgtcggtatcccctggcgcagtatccggccacggcccggctgcttcagggaggg
gagttcatggtgatccgcatggacgatccggaagcggatccccacgagaaggcgtggatg
cgggagttcgggtatcagacctgcctgatgctcccgctgtgggtccggggccgcgccatc
ggcctgatcgagctcagcgaggcccggttgcggacgttcacggaggaggagatccagctg
gcccgggccctcgcggatcaggtgagcgtggccctggccaacacgatgctctatgaggcg
gagcagcgccgggcggggctgctggaggcgttgagccggatcacccggccgctgacgggg
gcgttgcggatcccggaggtgttcgagacggcggcccggcagatcgtggccgagatgggg
atctgcgacggggccgttctcttccgggtcagcgcggaccgggcgcatgtcgaggtggcc
gcctccgccggcctgctctcggaataccttcccgccggggaccttcggccgatgggcggc
gtcctggcctggagcatcgaaaacgatgcgatcgtgcgcatcatggacacgcggcaggat
gagcgctatcagcccctcgtgccagaggagatggacccggtccgctcgctggcggtcatc
cccctccacctggaagggatagtggtcggagcgctggtgctcttctcggtccaccctgag
acgttccttccggaggatgagccgatcttccagtccctggccgatcacatcggcctggct
ctgcacaacgcccggctgtatgaagactcccagcagcggatcgcggagctcaccaccttg
caggaggtggccgctcaggtcacctccaccctcgatctccatcatgtgctcgaaacggtg
gccaggcggctgctggagcacacgggcgcggatcggatttacatccatctccgggatgag
gccggggagcgctggcgtggggggatgacgctcgcccgggaaggggagctccggtgggag
gtcccttcccctcgccccggcggggtcacggagaccgtgttccgaaccggacaccccttg
atcatcccggatgccaccgtgcatccgctgttccaggatgcggaggcgcggacgtggggg
gtgggggcggtcgcggccttccccctgcgtcacgccggccgtcccatcgggacgctccac
gtagttttcggggagccccggctgttccgcgcggacgagctccgctggctgggcacggtg
gtcgatcaggtggccgtggccatcgccaacgcccagctctacgaggccgcccgccagcgc
ctcgccgagctggagatcctgcgccgggcctccgagatcgccgtccgctcgatggatttc
gagactctggtggagcagaccctgaagttgctgcaggaggtgcccgccttccgctatgtg
gccctcttcctgaccgacccgctggatccccatctcctgatccggtatcggaccggggag
cggccggaggaggcacaacggatgttgcggttacgcctcggggagggcgttgtcgggcgg
gcaggggccacacgggccccggtgtgcgtcccggacgtgcaggccgatgcgggctatctc
ccggccatcccggagacacgggccgagctggcggtccccctgctcgccggcgaccgcctg
gtcggagtcctggacgtccagagcccggagccgggggccttccgggaggagcacatccgt
ctgctcagcgctctggccggccagctggccatcgccctggagaacgcccggctcttccaa
acggtgcgtcgccgcctgaacgagttgacgatcctgtatgaggtgatcaccgccgcggca
gtgaccctggatccggaccgggtcgtccgccaggccctcgcggccatccagcgcaccctg
ggcttcgaggcgatggagtgcctgctgctggaggaagagacggggacgctgaagagcatc
ggacattacggcttctcggagcaggcccttcgcgtccctctgaccgtcaagcagggcatc
tgcgggcgggtcgcccgcaccgggatgcccgccctggtgccggacgtgcgacaggatccg
gactacatcgaggcggagcccagcacccggtccgagctgacggtcccgctgaagatcggg
gagcgggtgatcggggtgctgaacgcggagagcccgcgcggagagcccgcggcccaacgc
cttcagcgaggaggatctgcgcctgatgaccgtcctggcaggccatctcgcggtgctgct
ggagaacgcccgcctccatcgcgagaccgcccagcgcctgcgggaggtgaccaccctgta
tga
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