Thermoflexus hugenholtzii: KNN16_10120
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Entry
KNN16_10120 CDS
T07254
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thug03016
]
KNN16_10120 (truB)
Enzymes [BR:
thug01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KNN16_10120 (truB)
Transfer RNA biogenesis [BR:
thug03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KNN16_10120 (truB)
Prokaryotic type
KNN16_10120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QWK09722
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All DBs
Position
2234962..2235852
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AA seq
296 aa
AA seq
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MKGPAGLLVLDKPQGWTSHDVVERVRRLTRVRRVGHAGTLDPLATGVLVMLIGPATRLAE
FLLRHDKRYRATLRLGIATDTGDAEGRVLFERPVAISREAFEEVLQAFIGEIDQIPPAFS
AIRMGGERLYEKARRGEPVSPPPRRVRIDALRLVEWNPPWAVLEVDCSAGTYIRALARDI
GERLGCGAHLTALRRLASGPFTLADAVPWEAFEAAARAGSWTAYLRPVGEALPDWPPVTP
GEALLVRLRHGQALPAAALPHPGPRLRVHGPDGELIALLERRGDRWQPVRVFPEDP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcccgcaggcctgctggtgctggacaaaccccagggctggacctcccacgac
gttgtggagcgggtccggcggttgacccgcgtccggcgtgtgggccacgccgggaccctg
gatcccctggcgaccggggtgctggtgatgctgatcgggccggccacccggctggcggag
ttcctgctccggcacgacaagcgttaccgggccaccctccgcctggggatcgccaccgac
acgggagacgcggaaggacgggtcctgttcgagcggccggtggcgatctcgcgggaggcc
ttcgaggaggtcctgcaggctttcatcggggagatcgatcagatcccccccgccttctcc
gccatccggatgggcggggagcggctgtatgagaaggcccgccggggcgagccggtgtct
cccccgccgcgccgggtgcgcatcgacgccctgcggctggtggagtggaaccctccatgg
gcggtcctggaggtggactgctccgcgggcacgtatatccgcgccctggcccgggacatc
ggggagcgcctgggatgcggagcccatctgacggcgctgcggcgcctggccagcgggccc
ttcaccctggccgacgcggtcccctgggaggccttcgaggccgccgcccgggcgggatcc
tggacggcttacctgcgcccggtgggggaggcattgccggactggcccccggtgaccccg
ggcgaggcgctcctcgtccggctgcgccacggccaggccctcccggcggccgcgctcccc
catcccggcccccgcctccgggtccacgggccggacggggagctgatcgccctgctggag
cggcggggggaccgctggcagcccgtgcgggtgtttccggaggatccatga
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