Thermoflexus hugenholtzii: KNN16_11870
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Entry
KNN16_11870 CDS
T07254
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
thug
Thermoflexus hugenholtzii
Pathway
thug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KNN16_11870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thug03400
]
KNN16_11870
DNA repair and recombination proteins [BR:
thug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KNN16_11870
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MutS_III
MSSS
CdgR_N
Motif
Other DBs
NCBI-ProteinID:
QWK10057
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Position
2608799..2611144
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AA seq
781 aa
AA seq
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MREHDLITLEWPKIRERLAAYTAFPWSAEKARALRPSADPAEVLARLAETEEARQLLARE
PGFDLGGVRDLRPHLEAARHGATLSPADLLALWETLQTARRARRTLLRRSGEWPHLARYA
ARMQEFPELEEEIARCLDEAGEVKDEASPALRALRAEIRRLTQEIQSRLQTYLADPRYAP
YLQEPLITLRGDRFVIPVKAEHRGKIPGLVHDVSASGATLFIEPLPVVELGNRLRAARAQ
EEKEIARILAALSAAVGARAEEIRATLEAVADLDLALAKARYAIDLRAERPEIVPWPEEP
PERRTQSPLWLRQARHPLLDPQRVVPIDITPDPATFMLILTGPNTGGKTVTLKTVGLLAI
MAQSGLHIPAAEGSRLPVFDGIYADIGDEQSIEQNLSTFSAHLTNILGFLEKATARSLVL
LDELGAGTDPMEGAALARALLEHFHERRATTLVATHFPELKLWAQTTPGAVNASVEFDPE
TLAPTYRVRIGLPGRSNAFLIARRLGMPEALIARAQRYVSPEALRLEALLTEAERLRAEA
ARAWEEAEQARAAARALEAEWRERIARIEAERERLLREAREQIEALLREAQEEVERVRRQ
VRRIHQAEVEAARQRLEALRARARSLRTSPPAAPEAPAGPAFAIGDRVWVRPLQAEGEIL
HIEGEEADVQVGRWRLRMPLADLERRERPTPPPAAAPSPPPPAGVALDLDLRGMRVEDAL
PVLEKFLDDAFLAGMPFVRIIHGKGTGALRRAVRERLKGHPHVEAFEPTPDDGATVVRLA
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagcacgacctgatcaccctggaatggcccaagatccgggagcggctggcggct
tacaccgccttcccctggagcgcggagaaggcccgcgccctgcgcccctccgccgaccct
gctgaggtccttgcccggctcgccgaaacggaggaggcccgccagctcctcgcccgggag
cccggcttcgacctgggtggggtccgggatctccgcccccacctggaggcagcccggcac
ggggcgaccctctccccggccgacctcctcgccctgtgggagaccctgcagacggcccgg
cgcgcccgccggaccctgctgcggcgatccggggagtggccccatctggcccgctatgcc
gcccgcatgcaggagttcccggaactggaggaggagatcgcccgctgcctggacgaggcg
ggggaggtgaaggacgaggccagcccggccctccgggctctgcgcgccgagatccgccgc
ctgacccaggagatccagagccggctacagacttacctcgcggacccccgctacgcgccg
tatctgcaggagcccctgatcaccctgcgcggggaccgcttcgtgatcccggtgaaggcc
gagcatcgggggaagatcccgggcctggtccacgacgtctccgccagcggggccaccctg
ttcatcgagccgttgccggtggtggagctggggaatcggcttcgcgcggcccgggcccag
gaggagaaggagatcgcccgcatcctggccgccttaagcgccgccgtgggcgcccgggcg
gaggagatccgcgccaccctggaggccgtggcggatctcgacctggcgctggccaaggcc
cgctacgccatcgatctgcgcgcggagcgcccggagatcgtcccgtggccggaggagccc
cccgagcgacggacccagtcgcccctctggctgcgccaggcccgccacccgctgctggat
ccccagcgggtggtgcccattgacatcacgccggaccccgccacgttcatgctcatcctc
accggtcccaacaccggcggcaagacggtgaccctgaaaaccgtagggctcctggcgatc
atggcccagagcggcctgcacatcccggcggcagagggctcccgcctgccggtgttcgac
ggcatttacgccgacatcggggacgagcagagtatcgagcagaacctctccaccttctcc
gctcacctcaccaacatcctgggctttttggagaaagccaccgcccgctccctggtgctc
ctggacgagctgggggcggggacggatccgatggagggggcggcgctggcccgcgccctg
ctggagcacttccacgagcggagggccaccaccctggtggccacccacttcccggagctc
aagctgtgggcccagaccacgccgggggcggtcaacgccagcgtggagttcgacccggag
accctggcccccacctatcgggtgcgcatcgggcttcccgggcgctccaacgccttcctc
atcgcccgccggctggggatgcccgaagccctgatcgcccgcgcgcagcgctatgtttcg
ccggaggccctgcgcctggaggcgctgctaacggaggccgagcggctgcgagcggaggcc
gcccgggcctgggaggaggctgaacaggcccgggccgccgcccgcgccctggaagccgaa
tggcgcgagcgcatcgcccgcatcgaggcggagcgggagcggctgctccgcgaggcccgg
gagcagatcgaggcgctgctccgggaagcgcaagaagaggtggaacgcgtccgacggcag
gtccggcggatccatcaggcggaggtggaggccgcccggcagcgcctggaggccctgcgg
gcccgcgcccggagcctccgcacgtccccgcccgcggcgccggaggcccctgcggggccc
gccttcgccatcggcgaccgcgtatgggtgcgccccctccaggcggaaggcgagatcctc
cacatcgagggcgaggaggcggacgtgcaggtgggccgctggcggctgcggatgcccctc
gcagacctggagcgccgggaacggcccaccccgcccccggccgccgccccctcccctccg
ccgccggccggggtggccctggacctcgacctgcgggggatgcgggtggaggacgccctc
cccgtccttgagaaattcctggacgacgccttcctggccggcatgcccttcgtgcggatc
atccatggcaagggcaccggggcgctgcgccgggccgtgcgggagcgcctgaaagggcat
cctcacgtggaggcgttcgagcccaccccggacgacggcgccaccgtcgtgcggctggcg
cggtga
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