Thermoflexus hugenholtzii: KNN16_12050
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Entry
KNN16_12050 CDS
T07254
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KNN16_12050 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thug03019
]
KNN16_12050 (rnc)
03009 Ribosome biogenesis [BR:
thug03009
]
KNN16_12050 (rnc)
03036 Chromosome and associated proteins [BR:
thug03036
]
KNN16_12050 (rnc)
Enzymes [BR:
thug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KNN16_12050 (rnc)
Messenger RNA biogenesis [BR:
thug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KNN16_12050 (rnc)
Ribosome biogenesis [BR:
thug03009
]
Eukaryotic type
90S particles
RNase
KNN16_12050 (rnc)
Prokaryotic type
rRNA processing factors
KNN16_12050 (rnc)
Chromosome and associated proteins [BR:
thug03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KNN16_12050 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QWK10091
LinkDB
All DBs
Position
complement(2648895..2649740)
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AA seq
281 aa
AA seq
DB search
MGILRSRMGRLLENLPGWRREPSPSPTRSDEAPSGSTGTVREEGAPPASPEDSLRLLEER
LGWSFRNPEWLREALTHRSYVNEHPGEGVRDNERLEFLGDAVLQLVVSAELFRRFPDWPE
GRLTALRTALIRGEQLTAWAEALELGRFLRLGKGEAEGSRTRPSILADAFEALLGALYLD
GGLAAAEALLRRLLPEAIAQALENLERHDPKGRLQQWSQAVRGQTPVYEVVAVEGPPHAA
RFTVRVRIGEEVVGEGQGTSKREATREAARDALRRLGLEDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcctgcgtagccggatgggacgcctcttggaaaacctcccgggatggcgtcgg
gagccctctccgtcccccacccgttcggatgaggcgccctccggatccaccgggacggtc
cgggaggaaggggcgcctcccgcttcccctgaagactcgctccggctcctggaggagcgc
ctgggctggtcgttccggaaccccgagtggcttcgggaggccctgacccaccgctcctac
gtcaacgagcaccccggggagggggtccgagataacgagcggctggagttcctgggggac
gcggtgctgcagctggtcgtcagcgcggagctgttccgccgcttcccggattggccggag
gggcgcctgacggccctgcggactgccctcattcggggcgagcagctcacggcctgggcc
gaggccctggagctcggccgcttcctccggctgggaaagggagaggcggagggaagccgg
acccggccctccatcctggcagacgccttcgaagccctcctgggggcgttgtatctggac
ggcgggctggcggcggccgaggccctgctgcgccggctgcttccggaggccatcgcgcag
gccctggagaacctggagcggcacgatccgaaggggcgcctgcagcagtggagccaggcg
gtgcggggccagacgccggtctatgaggtggtggcggtggagggccctccccacgcggcg
cgcttcaccgtgcgggtgcggatcggggaggaggtggtcggggaaggccaggggaccagc
aaacgggaggccacccgggaggccgcccgggatgccctgcggcgcctgggcctggaggac
gcgtaa
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