Thermoflexus hugenholtzii: KNN16_12995
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Entry
KNN16_12995 CDS
T07254
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thug03016
]
KNN16_12995
Enzymes [BR:
thug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KNN16_12995
Transfer RNA biogenesis [BR:
thug03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KNN16_12995
Prokaryotic type
KNN16_12995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QWK10269
LinkDB
All DBs
Position
complement(2847438..2848454)
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AA seq
338 aa
AA seq
DB search
MIEIVFLGTSASAPSIRRGLPAHVVMFEDRRFLVDCGEGTQRQLLKSGLGFRRLETILLT
HAHLDHILGLAGFLSTVMRWEILPRVAIYGRRGTIERVKDLIYRVVLRGVRPSIEISFHV
IEPGLLFEDEKLSVYAFPVTHRGGDSLGYLFREKPRRPFLVEKAEALGIPPGPERRRLVQ
GEPVTLPDGRVVRPDDVLGPPVEGASLALVGDAGRVDDLVEAVRGVGALVIEATYLEADR
DLARRHDHLTAAEAAGLARAAGVGHLILTHVSRRYREREIRQEAMALFPRVWVARDFDRY
RILKDGQLEVERAEVHEIEEERDVLAESERAGAGHGGL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagatcgtcttcctgggcacctccgcctccgccccttcgatccggcgcgggctg
cccgcccacgtggtgatgttcgaggaccgccgcttcctggtggattgcggggagggaacc
cagcggcagctgctgaagagcggcctgggcttccgccgtctggagaccatcctgctcacc
cacgcccacctggaccacatcctggggctggcagggtttctgtcgacggtgatgcgctgg
gagatcctcccccgcgtggccatctacggtcgtcgcgggaccatcgagcgggtgaaggat
ctgatctaccgggtggtcctgcgcggggtgcggccctccattgagatctccttccacgtc
atcgagcccggactgctcttcgaggacgagaagctcagcgtctacgccttcccggtcacc
catcgcggcggggacagcctggggtatctctttcgggagaagccgcgacggcccttcctg
gttgaaaaggccgaggccctggggatccccccgggcccggagcgccggcgcctggtgcag
ggggagccggtgaccctgcccgacgggcgagtggtgaggccggacgacgtgctggggcca
ccggtggagggggcgtccctggccctggtgggggacgcgggtcgggtggacgatctggtg
gaggccgtccggggagtgggggcgctggtgatcgaggccacctatctggaggcggaccgg
gacctggcccgtcgccacgaccatctcaccgccgccgaggcggccgggctggcccgcgcg
gccggggtggggcatctgatcctgacccatgtctcccgacgctaccgggagcgggagatc
cggcaggaggcgatggccctcttcccccgggtctgggtggcccgggacttcgatcgctat
cgcatcctgaaagatggccagctggaggtagaacgagcggaggtccacgaaatcgaggag
gaacgggatgtccttgcggaaagcgagcgtgctggagctggccacggcggcctatga
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