Thermococcus sp. 2319x1: ADU37_CDS04620
Help
Entry
ADU37_CDS04620 CDS
T04245
Name
(GenBank) Transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
thv
Thermococcus sp. 2319x1
Pathway
thv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ADU37_CDS04620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thv03021
]
ADU37_CDS04620
Transcription machinery [BR:
thv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ADU37_CDS04620
Prokaryotic type
Archaeal type
TFB
ADU37_CDS04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
BRF2-like_C_cyclin_rpt
Zn_ribbon_RRN7
HARE-HTH
A2L_zn_ribbon
Zn_Ribbon_Prim
HTH_Tnp_ISL3
DUF4143
Lar_restr_allev
FtrD-like
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
RB_B
FYDLN_acid
Trm112p
Ribosomal_S27e
DUF7567
Zn_ribbon_IS1595
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ALV62161
UniProt:
A0A0U3SWR8
LinkDB
All DBs
Position
407824..408723
Genome browser
AA seq
299 aa
AA seq
DB search
MTKHRVCPVCGSEKFVYDPERGEVICANCGFVIQENIIDMGPEWRAFDASQREKRSRTGA
PESILLHDKGLSTDIGYDRNVKGLMREKIYRLRKWQSRLRVSDAAERNLAFALSELDRLG
ARLNLPKHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIADIAK
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKTKRRAIELLEKAYEMG
LTSGKSPAGLVAAALYIAGLLEGEKRTQREVAEVARVTEVTVRNRYKEIVEKLGLKLPL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgactaagcatagggtttgcccagtttgcggttccgagaagtttgtttatgaccccgaa
aggggagaggtaatctgtgcaaattgtggttttgtaattcaggagaacattattgatatg
ggtcccgaatggagggcatttgacgcttctcaaagggagaagcgttctaggactggtgcg
cctgagagcattctgctgcacgataagggcctttcgacggatattggttacgacagaaat
gttaagggcttgatgagggagaagatttaccgtctcaggaagtggcagagcaggttgagg
gttagcgatgccgccgagagaaatcttgcttttgccttgagtgagctcgacagacttggt
gcgaggttaaaccttccaaagcacgttgaagaagaggctgcgaggctttacagggaggcc
gttagaaaaggccttattaggggcaggtcgattgagagtgttattgctgcctgcgtttac
gctgcatgcagactcttgaagattccgagaactctcgatgaaattgcagatattgccaag
gtcgacaagaaagaaattggcaggagcttcaggttcattgcgaggaatttgaatttgact
cccaagaagctcttcgtgaagccgactgattacgttaacaagtttgccgatgagctcggc
ttaagtgagaaaaccaagagaagggcaatagagctccttgaaaaggcttacgagatgggc
ttgacgagtggtaaaagccctgctggccttgttgctgctgcactttacatagccggtctt
ctcgaaggagagaagagaactcagagggaagtggcggaagtggcaagagtaacagaggtc
acagtaagaaacaggtacaaagaaatagtagagaaactagggctaaagctcccactttga
DBGET
integrated database retrieval system
