Thermococcus sp. 2319x1: ADU37_CDS06150
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Entry
ADU37_CDS06150 CDS
T04245
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thv
Thermococcus sp. 2319x1
Pathway
thv03410
Base excision repair
thv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ADU37_CDS06150
03430 Mismatch repair
ADU37_CDS06150
03440 Homologous recombination
ADU37_CDS06150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thv03400
]
ADU37_CDS06150
DNA repair and recombination proteins [BR:
thv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ADU37_CDS06150
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ADU37_CDS06150
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ADU37_CDS06150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ALV62314
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All DBs
Position
538045..539472
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AA seq
475 aa
AA seq
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MDKNAFLEKVREGAELIKMHIELGHTIRIISHRDADGITAGAILAKALAREGANFHLSIV
KQLGEDTLKELAEEKQKIYVFSDLGSGSIKLIENYLRDASVVIADHHPPEDGEIEQENHI
LVNPTQFGADSVRDLSGSGVAYFIARAINERNKDLSYLALVGAVGDMQELDGQFHGMNID
IIEDAKELDLIELRKELRLFGRETRTLAQMLAYASNPELPGVTGDLRNAIEFLRSKGFDP
DMRYWQLREEEKRKLHDALVIHLIKNNASKEDIDRLIGDVVLIKLYSEGDPRHEAREFAT
LLNATGRLKTGTLGVAICLGDEKAFKDALKLVDEYKREQIEMRKYLIQNWSNAVEKEHVY
IFYAGKNIKDTMVGIAATMAINAQLAKPEKPVIVLADSEEDGLIKGSARTTKRGIEKGYN
LGEALRKAAEILGGEGGGHAIAAGIRIPKDKIDEFAELIDKLLEEQNSSGGTDEN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggataagaacgcatttttggagaaggttagggaaggtgcagagctaataaagatgcat
attgagttaggccatactatccgtattatttcacacagggatgcggatggcataaccgcc
ggtgcaattctagcaaaagcccttgctagggaaggtgcgaattttcatctcagcatagtg
aaacagcttggggaagatacgttaaaagagcttgcagaagaaaagcaaaaaatttatgtt
ttcagtgatcttggaagcgggtctataaagctgattgagaactatctaagggatgccagt
gttgttatagcggatcatcaccctccagaagatggcgaaatcgaacaagaaaaccatata
cttgtaaatcccacccaatttggagcggatagcgttagagacttgagcggttccggtgtg
gcctacttcatagcaagggccataaacgaaagaaacaaagatctaagctacttggctttg
gttggtgcagttggtgatatgcaagagctcgatggacaatttcatggaatgaacattgat
ataatagaagatgcaaaagagctggacttgatagaactccgtaaagagctgaggctcttt
ggaagagaaacccggactttggctcagatgctcgcttatgcatcaaatccagaacttccg
ggtgttacaggggatttgagaaatgcaatagaattcctgcgcagcaagggctttgatcca
gatatgaggtactggcagcttagagaagaagaaaaaagaaagctccacgatgcacttgtt
attcacttgattaagaacaacgcttctaaagaggacattgacaggcttatcggtgacgtt
gtgctgattaagctctattctgaaggagaccctaggcatgaggcaagggaatttgctacc
ctcctaaatgctacgggaaggcttaaaacgggcactttgggcgttgcaatatgtctgggg
gacgagaaggcattcaaagatgcattaaaactcgtggacgagtacaagagggagcaaata
gagatgaggaaatacttgatacaaaactggagcaatgcagttgaaaaagaacatgtctac
atattctacgccggcaaaaacatcaaagacacaatggtcggaatagcggcaacaatggcg
ataaatgcccagcttgcaaaaccagaaaagcctgtaatcgttttagcggacagtgaagag
gacggattgataaagggttccgctagaacaacaaaaagaggaattgaaaaaggatacaac
ttgggagaagccttaagaaaagccgcagaaattcttggaggagaaggaggagggcatgca
atagcagcgggcataagaattcccaaagataaaatagatgaatttgctgaactaatagac
aagctccttgaagagcagaattcaagcggtgggacggatgaaaattaa
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