Thermococcus sp. 2319x1: ADU37_CDS14110
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Entry
ADU37_CDS14110 CDS
T04245
Name
(GenBank) Ribonuclease PH
KO
K11600
exosome complex component RRP41
Organism
thv
Thermococcus sp. 2319x1
Pathway
thv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADU37_CDS14110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thv03019
]
ADU37_CDS14110
Messenger RNA biogenesis [BR:
thv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ADU37_CDS14110
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ADU37_CDS14110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ALV63110
LinkDB
All DBs
Position
complement(1187368..1188111)
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AA seq
247 aa
AA seq
DB search
MMGRPEGLKLIDENGKRIDGRKKYELRPIKMEVGVLKSADGSAYVEWGKNKILAAVYGPR
EIHPKHLQKPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPAIILELFPR
TSIDVFVEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIDGEIVLDLNKEED
NYGEADVPVAIMPIKNDITLLQMDGYLTKEEFLEAVRLAIKGAKAVYQKQREALKEKYLK
IAEEVGE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaggcctgagggactcaagcttattgatgagaacggcaagaggattgatgga
aggaaaaagtacgagctgagaccaattaaaatggaggttggagttttaaagagtgcagat
ggctctgcatatgtagaatgggggaagaataaaattttagcggcggtttatgggcctaga
gagattcatccaaagcaccttcagaagcccgacagagcgattttgagagtcaggtacaat
atggcaccctttagtgttgaggagagaaaaaaacccggaccagacaggagaagcatagaa
ataagcaaagttattagaggggcccttgaaccagccattatccttgaactatttccgaga
acttccatagacgtgttcgttgaggtgcttcaagcagatgcaggtacaagggtagctgga
attaccgcggcttcccttgctttggcagacgccgggattcctatgagggacttagttgca
gcatgtgccgccgggaagatagacggggagatcgttcttgacctgaataaagaggaagac
aactatggggaagctgatgttccagttgcgataatgcccatcaagaacgacataaccctt
ctccagatggacggatacctcaccaaggaggaattccttgaagcagtaaggcttgcaata
aagggagctaaggcagtgtatcaaaaacagagagaggctttgaaggagaagtatctcaag
atagcggaagaggtaggtgagtaa
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