Thermococcus sp. 2319x1: ADU37_CDS15520
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Entry
ADU37_CDS15520 CDS
T04245
Name
(GenBank) Transcription initiation factor B
KO
K03124
transcription initiation factor TFIIB
Organism
thv
Thermococcus sp. 2319x1
Pathway
thv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ADU37_CDS15520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thv03021
]
ADU37_CDS15520
Transcription machinery [BR:
thv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ADU37_CDS15520
Prokaryotic type
Archaeal type
TFB
ADU37_CDS15520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Cyclin_N
Sigma70_r4
Zn_ribbon_tTFIIB
Zn_ribbon_3
HTH_Tnp_ISL3
Cas12f1-like_TNB
Lar_restr_allev
Zn_ribbon_LysW
Zn_Ribbon_YjdM
Zn_ribbon_4
DUF7351
A2L_zn_ribbon
HTH_24
RUBY_RBDX
DZR
BRF2-like_C_cyclin_rpt
Zn_ribbon_IS1595
UMPH-1
UNC45-central
FYDLN_acid
zf-tcix
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
ALV63251
LinkDB
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Position
complement(1305311..1306231)
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AA seq
306 aa
AA seq
DB search
MTQLGGIKRCPNCGSESLIYDPSRAEIVCSNCGYVLAEEIMDLGPEWRAFEPGQREKRSR
VGAPETVMLHDKGLSTDIDWRNKDIHGSNISGSIRTKIYRLRMWQRRMRISDAIDRNLAF
ALSELDRMGSQLGLTRNIREIAAVLYRKAVINKLVRGRSIEGMVSACLYAACRIANAPRT
LEEIEDVSKVDKREIGRSYRYLARELNLRLKPTSPIDYVIRFGDQLGVSEKTKRRAIKIL
DQAIEKGLTSGKGPTGIAAAAIYIASLLEGEKMTQREVAEVARVTEVTVRNRYKELVDKL
NIRIPT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaacttggaggtattaaaaggtgtcctaattgtggttcagaaagcttgatttat
gatccaagcagggctgagattgtttgctccaactgtggatatgttttagctgaggagatt
atggatttggggccggagtggagggctttcgagcctggacaaagggagaagcgttctaga
gtaggagcaccagaaaccgtaatgcttcatgataaggggctttctacagatatagattgg
agaaacaaggacatccatggaagcaatatctcagggagcattagaacaaagatataccgt
cttagaatgtggcagagaaggatgagaataagcgatgctatagacagaaatcttgcgttc
gctttgagcgagcttgatagaatgggttctcagctggggctcactaggaatataagagaa
attgcggcggttttgtacagaaaggccgtcattaacaaactcgttagaggaagatccata
gagggaatggtttccgcttgtctttacgcggcgtgcaggattgcaaatgcaccgagaacc
ttagaagagatagaggatgtgtcaaaagttgataaaagggagattgggagaagttataga
tatcttgctagagagctcaatcttcgactaaagccaacaagccctattgattacgttata
agatttggagatcagctcggagtaagtgaaaagacaaaaaggagggcaataaagatacta
gatcaggcaattgaaaaaggtcttacaagtgggaaaggtccaacaggaatagctgcagct
gccatttacatagcgagccttcttgagggggagaagatgacccaaagggaagtggctgag
gttgcgagggtgacggaagttacggtaaggaacaggtataaagaacttgtggacaaactt
aatatacgcatccccacttaa
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