Thioclava nitratireducens: BMG03_01655
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Entry
BMG03_01655 CDS
T04697
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thw
Thioclava nitratireducens
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thw03016
]
BMG03_01655
Enzymes [BR:
thw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BMG03_01655
Transfer RNA biogenesis [BR:
thw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BMG03_01655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AQS46653
LinkDB
All DBs
Position
complement(316763..317377)
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AA seq
204 aa
AA seq
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MAIHLHQNDLPDGLDLGPVVAIDSETMGLDPRRDRLCLVQLSAGDGDAHLVKIAQGQTEA
PNLCRMLADPSVEKLFHFARFDVAALYNAFGVETKPVFCTKIASKMVRTFTDRHGLKVLV
QELVGVDISKQQQSSDWGAAELTDAQMEYAASDVLYLHQIKAELVKRLERENRIGLAQAC
FDFLPTRAKLDLLGWDEPNDIFHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtggcaatccacctgcatcaaaacgaccttcccgacgggctcgatctcggtcccgtcgtg
gccatcgactccgaaacgatgggccttgacccgcgccgcgaccggctctgcctcgtgcag
ctttcggcgggcgatggcgacgcgcatctggtgaagatcgcccaaggtcagaccgaagcg
ccgaacctgtgccgcatgctggccgatccgtcggtggagaagctgttccacttcgcgcgc
ttcgacgtggcggccctctacaacgcgttcggggttgagacgaagccggtcttctgcacc
aagatcgcctcgaagatggtgcggaccttcaccgatcgccacgggctcaaggtgctggtg
caggagcttgtcggcgtcgacatttccaagcagcagcaaagctcggactggggcgcggcg
gagctgaccgacgcgcagatggaatacgcggcctcggacgtgctctacctgcaccagatc
aaggctgaactggtcaagcggctggagcgcgagaaccggatcgggctggcgcaggcctgt
tttgatttcctgccgacgcgtgcgaagctcgatctgctgggctgggatgaacccaatgac
atcttccaccactga
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