Thioclava nitratireducens: BMG03_06000
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Entry
BMG03_06000 CDS
T04697
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
thw
Thioclava nitratireducens
Pathway
thw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BMG03_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thw03400
]
BMG03_06000
DNA repair and recombination proteins [BR:
thw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BMG03_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AQS47400
LinkDB
All DBs
Position
1202850..1203767
Genome browser
AA seq
305 aa
AA seq
DB search
MASRAIWKGQLRLSLVSIPVEIHSATKSGARLSFRQIHGPSGKRVHYEKTVPGIGPIDAD
EILKGYELGDDEYLLLEPEEIDAIKLETKKTLELVQFVDASEIPPLYYDRPYYVVPTDDL
AQDAYRVVRDALRQSKKVGLGQLVMRGKEYLCALRPCGDGILLETLHYADEIREADPLFS
DIEDEPADKELLEVATQLIDRKTDSFDASAFTDHYDAALRDLIDRKRKSKKTPRAKAGED
DSSRGGDNVVDLMSALQDSLKADGSDKSGGKSTGRKSSSKTSGAKSSGSKSSKSSGAKSS
TKKSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgcgcgatctggaaaggccagctcagactgtcgctggtcagcatccccgtc
gaaatccactccgcgaccaaatccggcgcgcgactgtcgttccggcaaatccatgggcct
tcgggcaagcgtgtccattatgagaagaccgtccccggcatcgggcccatcgacgccgac
gagattctcaagggctacgagctcggcgacgatgaatatctgctgctggagcccgaagag
atcgacgcgatcaagctggaaacaaagaagacgcttgagcttgtgcaattcgtcgacgcg
tccgaaatcccaccgctttattacgaccggccctattacgtcgtgccgaccgacgatctg
gcgcaggatgcctaccgggtggtgcgcgatgcgctgcggcaatcgaagaaggtggggctt
ggccaactggtgatgcgcggcaaggaatatctctgcgcgctgcggccctgcggcgacggc
atcctgctggagactctgcattatgccgacgagatccgcgaagccgacccgctgttctcc
gacatcgaggacgaacctgcggacaaagagcttctggaggtcgccactcagttgatcgac
cgcaagaccgacagcttcgacgcctccgccttcaccgatcactacgacgcggctttgcgc
gatctgatcgaccgcaaacgcaagtcgaagaagacgccccgcgccaaggcgggcgaggat
gacagcagcagaggcggcgataacgtggtcgacctgatgtcggcgctgcaggacagcctc
aaggccgatggcagcgacaaatccgggggcaaatcgacgggtcgcaaatcgtcatcgaaa
acctccggcgcgaagtcatccgggtcgaaatccagcaaatcctccggcgcgaagtcctca
accaagaagtcggcgtga
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