Thioclava nitratireducens: BMG03_06160
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Entry
BMG03_06160 CDS
T04697
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thw
Thioclava nitratireducens
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thw03032
]
BMG03_06160
03400 DNA repair and recombination proteins [BR:
thw03400
]
BMG03_06160
Enzymes [BR:
thw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BMG03_06160
DNA replication proteins [BR:
thw03032
]
Prokaryotic type
DNA Topoisomerases
BMG03_06160
DNA repair and recombination proteins [BR:
thw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BMG03_06160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AQS47427
LinkDB
All DBs
Position
complement(1235649..1236644)
Genome browser
AA seq
331 aa
AA seq
DB search
MKDLPDLVYYPDDRPGITRRRCGRGFTYTAPDGTTIARGAERRRIEALAVPPAYEDVWIS
PRPNGHLQATGRDARARKQYRYHPDWTEFRAQRKFDRLAEFGTVLPRLRRAILNDLRGHD
PGDRAFALAAVLALLDRTAIRVGNADYARENRSFGATTLRGAHMTLDGDTLHFSFNGKGG
AQVESELRDKTLERALTRLDDLPGAELITWLDEAGEPHSVRSEEVNAFLADRTGAEGLTA
KTFRTWNGSAAALEAAMRQADDGRVTIRVMAEAAAARLHNTPAIARNSYIHPEVIALSEA
EPEALTSLAQDAPAVDGLRRAEAQLLHLLDG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatctgcccgatctcgtctattatcccgatgaccgaccaggcatcacgcgccgg
cgctgcgggcgcgggttcacctataccgccccggatggcacgaccatcgcgcgcggtgcc
gagcgtaggcggatcgaggcactggcggtgccgcccgcctacgaggacgtctggatttca
ccacgtccgaacgggcatctgcaggcgacggggcgcgacgcgcgggcgcgcaagcaatac
cgctatcaccctgactggaccgagtttcgcgcgcagcgcaaattcgaccggctcgcggaa
ttcggcaccgtgctgccacgcctgcgtcgcgcgatcctgaacgatctgcgcggccatgat
ccgggcgaccgggccttcgcgctggccgcggttctggcgctgctcgaccggaccgcgatc
cgcgtcggcaatgccgattacgcccgcgagaaccgcagtttcggcgcgacgacattgcgt
ggcgcacatatgacgctcgacggggacacgctgcatttctccttcaacggcaagggtggc
gcgcaggtcgaaagcgagctccgcgacaagacgctggagcgcgcactgacgcggctcgac
gatttgccgggcgccgagctgatcacgtggctggacgaggcgggggagccccactcggtg
cgctccgaggaggtgaacgccttcctcgctgatcgcaccggggccgaagggctgacggcg
aagaccttccggacctggaacggatcggccgcggcgctcgaggcagcgatgcggcaggcg
gatgacgggcgcgtgacgatcagggtgatggcggaggctgccgccgcgcgccttcacaac
acgccggcgatcgcgcgcaattcctatatccaccccgaggtaattgcactgagcgaggcc
gagccggaggcgctcaccagcctcgctcaggacgctccggcggtggacgggctgcgccgc
gccgaggcgcagttgctccatcttctcgacggctga
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