KEGG   Thioclava nitratireducens: BMG03_07160
Entry
BMG03_07160       CDS       T04697                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
thw  Thioclava nitratireducens
Pathway
thw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMG03_07160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thw03019]
    BMG03_07160
Enzymes [BR:thw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BMG03_07160
Messenger RNA biogenesis [BR:thw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BMG03_07160
SSDB
Motif
Pfam: DEAD Helicase_C ResIII HEM4
Other DBs
NCBI-ProteinID: AQS47600
UniProt: A0ABM6IG29
LinkDB
Position
1435808..1437187
AA seq 459 aa
MSDFSSLGLSPAILKSLARAKFTQPTPIQEKAIPLVLAGHDVLGLAQTGTGKTLAFGLPL
IDKLMAQPGKPSPKTCKALILAPTRELVNQIADNLSGLVQGTKMNVATVVGGQSINRQIT
MMHRGNDILVATPGRLIDLMDRGAVDLRYTRHLVLDEADQMLDLGFIHALRKIASRLGTP
RQTLLFSATMPKQMEEISQAYLTDPKRVQVSPPGKAADKITQSVHFLDSKAEKARKLRDI
LSADMGALTLVFARTKHGAEKLMKSLRADGYNAESIHGNKSQGQRDRAIKGFRDGKVNVL
VATDVAARGIDIPGVSYVVNFDLPDVPDAYVHRIGRTARAGREGEAIAFCSPDEADNFLQ
IEKLMKIEIPTASGERPSEAVRPSARAGRGRGRGGPRSGGNKGRGGKPQGKPQGQGQGQG
QAQAQPRSKPRAEAKPKVDAGGNATPKRRRPRRRNAGAA
NT seq 1380 nt   +upstreamnt  +downstreamnt
ttgtccgatttctcttcgctggggctctccccggccattctcaagtcgctcgcacgcgca
aaattcacccagccgaccccgattcaggaaaaggcgattccgctggttcttgcgggccat
gacgtgctgggcctcgcccagaccggcaccggcaagacgctggcattcggcctgccgctc
atcgacaaactgatggcgcagccgggcaaaccttcgcccaagacctgcaaggcgctgatc
ctcgcgccgacccgcgaactggtgaaccagatcgccgacaacctctcggggctcgttcag
ggtaccaagatgaatgtcgccaccgtcgtcggcggccagtcgatcaaccgtcagatcacc
atgatgcatcgcggcaacgacattctcgtcgcgaccccgggccgtctgatcgaccttatg
gatcgcggcgcggtcgacctgcgctacacccgccatctggtgctcgacgaggccgaccag
atgctcgacctcggtttcatccacgcgctccgcaagatcgcatcgcgccttggcaccccg
cgccagacgctgctgttctcggccacgatgccgaagcagatggaggagatctcgcaggcc
tacctcaccgatccgaagcgtgtgcaggtctcgccccccggcaaggccgccgacaagatc
acccaatcggtgcacttcctcgacagcaaggccgagaaggcccgcaagctgcgcgatatt
ctctcggccgacatgggcgcgctgacgctcgtcttcgcccgcaccaagcatggcgctgaa
aagctgatgaagagcctccgcgcagacggctacaacgcggaatcgatccacggcaacaaa
tcgcaaggccagcgtgaccgcgcgatcaagggcttccgcgatggcaaggtcaacgtgctg
gtcgcgaccgatgtggccgcgcgcgggatcgacattccgggcgtgtcctatgtcgtgaac
ttcgacctgccggacgtgccggatgcctatgtccaccgtatcgggcgcaccgcgcgcgcc
ggtcgcgagggcgaggcgattgccttctgctcgccggacgaggcggataacttcctgcag
atcgaaaagctgatgaagatcgagatcccgaccgcgagcggcgaacgcccgtccgaggcc
gtgcgcccctccgcgcgcgcaggtcgtggccgcggtcgcggcggtccgcgctccggcggc
aacaagggtcgcggcggcaagccccagggcaaaccgcaggggcaggggcaaggccagggt
caagctcaggcccaaccgcgctcgaaaccgcgcgcggaagccaagcccaaggtcgacgcc
ggcggcaacgctacgccgaagcggcgtcgcccgcgtcggcgcaacgcaggcgccgcatga

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