Thioclava nitratireducens: BMG03_07980
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Entry
BMG03_07980 CDS
T04697
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thw
Thioclava nitratireducens
Pathway
thw03420
Nucleotide excision repair
thw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMG03_07980
03430 Mismatch repair
BMG03_07980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thw03400
]
BMG03_07980
Enzymes [BR:
thw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMG03_07980
DNA repair and recombination proteins [BR:
thw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMG03_07980
MMR (mismatch excision repair)
Other MMR factors
BMG03_07980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AQS47744
UniProt:
A0ABM6IG09
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All DBs
Position
1652672..1655122
Genome browser
AA seq
816 aa
AA seq
DB search
MNWADDDDPYEGAASLSQRAMAGAMQARAAPYLEKLNPQQRQAVETLDGPVLMLAGAGTG
KTSALTARIAHLIHTGRARPNEVLAVTFTNKAAREMKERVGRHLGGAIEGMPWLGTFHSV
CVKLLRRHAELVGLKSNFTILDTDDQIRLLKQLIVAANMDEKRWPARQLAGLIDGWKNKA
LTPEKVSGRETAAFDNRGSELYAAYQARLKTLNAVDFGDLLLHMVTIFQTQPDVLAQYQR
WFRYILVDEYQDTNVAQYLWLRLLAQGHKNICCVGDDDQSIYGWRGAEVGNILKFEKDFP
GAAVIRLEQNYRSTEHILSAASGLITANEGRLGKELWTEAEGGEKVRLIGHWDGEEEARW
IGEEVEAIQRGTRGNPPISLNSQAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLE
IRDAMAYFRLVTSPDDDLAFERIINTPKRGLGDKAQQRIQVAARENGLSLLDGARMLVAE
GALSGKAAGQLRLFVENVARWHEEVVQASPATAVTRAEDDELLIEPAEDGVAPANDLSHV
RLAERILEESGYVEMWQNDKTPEAPGRLENLKELVKALEQFDNLQGFLEHVALIMDNDKA
ETEEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRA
EELCTISFAGNRRVYGQWQSQMPSRFIDELPPAHIDVLTPPGLYGGGMNGGGFGGSSAME
DRVSRADVYNSPGWRRLQNAQSRGVSQPREARHMVIDAKGESDYEIGDRVFHKKFGYGEV
MGSEGDKLVVEFDKAGEKRLLSSFVVPAADADDVPF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaattgggctgatgacgacgatccatatgaaggggctgcgagcctgtcgcaacgtgcc
atggcgggcgccatgcaagcgcgcgcggcgccgtatctcgagaaactgaacccccaacag
cggcaggccgtcgagacgctcgacgggccggtgctgatgctggcaggcgcgggcacgggc
aagacctcggcgctgaccgcacggatcgcgcatctgatccacaccggccgggcgcgcccg
aacgaggtcttggcggtgaccttcaccaacaaggccgcgcgcgagatgaaagagcgtgtc
gggcgccacctgggcggtgcgatcgaggggatgccgtggctcggcacctttcactcggtc
tgcgtgaagctgttgcgccgccatgccgagctggtggggctgaagtcgaatttcaccatt
ctcgacaccgacgaccagatccggctgcttaagcagctgatcgtcgccgcgaatatggac
gagaaacgctggccggcacggcaactggcggggctgatcgacggctggaagaacaaggcg
cttacgcccgagaaggtctcgggccgcgagaccgcggccttcgacaatcgcggatccgag
ctttacgccgcctaccaggcacggttgaagacgctcaacgcggtcgatttcggcgatctg
ctgctgcacatggtcacaatcttccagacccagccagacgtattggcgcaatatcaacgc
tggttccgttacatcctcgtggacgagtatcaggacaccaacgtcgcgcaatacctgtgg
ctgcggcttctggcgcaagggcacaagaacatctgctgcgtgggcgatgacgaccagtcg
atctatggctggcgcggcgccgaggtcggcaacatcctgaagttcgagaaggatttcccg
ggcgcggcggtgatccggctggagcagaattaccgctcgaccgaacatatcctctccgcc
gcgtccgggctgatcacggccaatgagggccgtctgggcaaggagctctggaccgaagcc
gagggcggcgaaaaggtgcgcctgatcggtcattgggacggcgaggaagaggcgcgctgg
atcggcgaggaggtcgaggcgattcagcgcggcacccgtggcaatccgccgatcagtctg
aattcgcaggcgattctcgtgcgcgcctcgcatcagatgcgggccttcgaggaccgcttc
ctgaccatcggtttgccctatcgcgtcatcggcggcccgcgcttctacgagcggctcgaa
attcgcgacgcgatggcctatttccgcctcgtgacctcgcccgatgatgatctggctttc
gagcggatcatcaacacgcccaagcgcggccttggcgacaaggcgcagcagcgcattcag
gtggctgcgcgcgagaacggactgagcctgctggacggcgcgcggatgctggtggccgag
ggtgcgctttcgggcaaggcggccgggcagctgcggctcttcgtcgagaatgtcgcgcgc
tggcacgaggaggtcgtgcaggcctcgcctgcgaccgccgtgacacgggccgaggatgac
gagctgctgatcgagcccgccgaggatggtgtggcgcccgcaaatgacctcagccatgtg
cgtctggccgaacggatcctcgaggaatccggctatgtcgagatgtggcagaacgacaag
acgccggaagcaccggggcggctcgagaacctcaaggaactcgtcaaggcgttggagcag
ttcgacaatctgcagggcttcctcgaacacgtcgcgctgatcatggacaatgacaaggcc
gagaccgaggagaaagtctcgatcatgacactgcatgcggccaaaggtctggaattcccc
gtggtctttctgccgggctgggaggacgggctgttcccgtcgcagcgctcgatggacgag
agcggattgaagggcctcgaggaagagcgccgtttggcctatgtcggcatcacccgcgcc
gaggagctgtgcacgatttccttcgctggaaaccggcgggtctacggccaatggcaaagc
cagatgccctcgcgcttcatcgacgaactaccgcccgcccatatcgacgtgctgacccct
ccgggtctctatggcggcggcatgaacgggggcggctttggtggctccagcgcgatggaa
gaccgcgtctcgcgcgccgatgtctacaactcgcccggctggcggcggctgcaaaatgcg
caatcgcgcggggtcagccagccgcgcgaggcccgccacatggtgatcgacgccaagggc
gagagcgattacgagatcggcgaccgggtcttccacaagaaattcggctatggcgaggta
atgggctcggaaggcgacaagctcgtcgtcgaattcgacaaggcgggcgagaaacgtctg
ctgtcgagctttgtcgtgcccgccgcagatgccgacgacgtgccgttttaa
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