Thioclava nitratireducens: BMG03_10980
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Entry
BMG03_10980 CDS
T04697
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
thw
Thioclava nitratireducens
Pathway
thw02024
Quorum sensing
thw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMG03_10980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BMG03_10980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thw03019
]
BMG03_10980
03036 Chromosome and associated proteins [BR:
thw03036
]
BMG03_10980
Messenger RNA biogenesis [BR:
thw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BMG03_10980
Chromosome and associated proteins [BR:
thw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BMG03_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
AQS49842
UniProt:
A0ABM6IM02
LinkDB
All DBs
Position
complement(2295193..2295426)
Genome browser
AA seq
77 aa
AA seq
DB search
MAGDKQNLQDAFLNHVRKTKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHA
ISTIMPGQPISLYEGDD
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgacaaacagaacctgcaagacgcatttctcaatcatgtgcgcaagacaaag
gttcctgtcacgatcttcctgatcaacggggtgaagctgcagggcgtcatcacctggttt
gacaacttctgtgtgcttctgcgccgcgacgggcaatctcagcttgtttacaagcacgcg
atctcgacgatcatgccgggacaacctatctcgctttacgaaggcgacgactaa
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