Thioclava nitratireducens: BMG03_15930
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Entry
BMG03_15930 CDS
T04697
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thw
Thioclava nitratireducens
Pathway
thw03030
DNA replication
thw03430
Mismatch repair
thw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMG03_15930
03430 Mismatch repair
BMG03_15930
03440 Homologous recombination
BMG03_15930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thw03032
]
BMG03_15930
03400 DNA repair and recombination proteins [BR:
thw03400
]
BMG03_15930
Enzymes [BR:
thw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMG03_15930
DNA replication proteins [BR:
thw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMG03_15930
DNA repair and recombination proteins [BR:
thw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMG03_15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
tRNA_anti_2
DUF655
BAT
Motif
Other DBs
NCBI-ProteinID:
AQS49946
LinkDB
All DBs
Position
complement(3311072..3314572)
Genome browser
AA seq
1166 aa
AA seq
DB search
MTSPRFIHLRVHTEYSLLEGAVPAKKLVKMCESAGMPAVAVTDTNNMFAALEFSVTATGA
GLQPIVGCQVSLEFDPAKPGERPRLPAPIVLLAQTERGYENLMKLNSCLYLDKHGAQIQV
TLEELERHSEGLICLSGGPDGPVGRLIRNGAKDRAKALLQQLAGIYPNRLYVELQRHPGE
GGTLTEAEIATERPFVEWAYELGLPLVATNDVYFPKPEIYEAHDAMICIAEGAYVDQIEP
RRRLTPQHYFKSEGEMVALFADLPEAVENTVEIAKRCAFSTYKRAPILPKFADDEVEELR
RQAWDGLRNRLDVIPHAAPVEDYEARLKFELDIIEQMGFPGYFLIVADFIKWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QKKYGREKVGQIITFGALLSKAAVRDVGRVLQMSYGQVDKLSKLIPVEGVKPVSIEKALA
DEPRLREAARNEEVVARLLDYAKAIEGLLRNASTHAAGVVIGDRPIDELVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIRSAMELIFKSGRPLHVDAAGNQLYEPAEGAE
NHINAIPLDDPKTYKLYADAKTVAVFQVESEGMKSALRQMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLREITSVHPTIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEAGAAKNGVDKKKASEVFDLLEKFANYGFNKSHAAAYAVVSYY
TGWLKANHAVEFMGGVMNCDIHLTDKLAIYADEVQKKLGIEIIPPCVNRSLSTFDVVDQK
LVYALGALKNVGVDAMQMIVTARGDEPFKDLFDFARRVDMKRVGKRPLEMLARAGAFDLL
DPNRKRVFESLESLMAWSGAVIEARESAQVSLFGEAGDDLPPPRLADTDDWLPGERLAEE
HKAIGFYLSGHPIEDYLPALKRKKVLSWEEVQQKAVGGPFVTKIAGEVASVREKKSAKGN
RFAFVALSDASGPYEVAFWSEALEACRDVLETGNLLVLTVKVEVDGESVRMVANAAQTVD
KATADAGSSGLLVHIDDNDAVASVASLVERVAREGKVHSRGPISFMVYDNERGCRYQITA
MPEAPVNAQVKGALRSLRGVSEVEEV
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcccccgattcattcatctgcgcgtccataccgagtattccctgctcgaaggc
gccgtgcccgcaaagaaactcgtgaagatgtgcgagtcggcggggatgcccgccgtcgcc
gtgaccgacacgaacaacatgttcgcggcgctcgagttttccgtgaccgcgacgggggcg
gggctgcagccgatcgtcggttgtcaggtatcgctcgaattcgatcccgccaagccgggc
gagcgtccgcgcctgcctgcaccgatcgttctgctggcccagaccgagcgcggctacgag
aacctgatgaagctgaactcgtgcctctatctcgacaagcacggggcgcagattcaggtc
actctggaggagctggagcgccattccgaggggctgatctgtctctctggcggtcccgac
ggtccggttggacggctgatccggaacggcgcgaaggaccgcgccaaggcgcttctgcaa
cagctcgccggcatctacccgaaccggctctatgtcgaattacagcgccacccgggcgag
ggcggcacgctgaccgaggccgagatcgcgaccgagcggccgttcgtcgaatgggcctac
gagctgggtctgccgctggtcgcgaccaacgacgtctatttcccgaagcccgagatttac
gaggcccatgacgcgatgatctgtatcgcggagggcgcctatgtcgatcagatcgagccg
cgccgccgtctgaccccgcagcattatttcaagtccgaaggcgagatggtcgcgctcttc
gccgatctgcccgaagcggtggagaacacggtcgagatcgcgaaacgctgcgccttctcg
acctacaagcgggcaccgatcctgccgaaattcgccgatgacgaggtcgaggaactgcgg
cgtcaggcgtgggacgggttgcgcaaccgcctcgacgtgatcccgcatgcagcgccggtc
gaggattacgaggcgcggctgaaattcgaactcgacatcatcgagcagatgggtttcccg
ggctacttcctgatcgttgccgacttcatcaaatgggccaaggatcacgacattccggtc
gggccggggcgcggctcgggtgcaggttcgctggtcgcctacgctcttaccatcaccgac
cttgatccgctgcgctattcgctgctgttcgaacgcttcctcaacccggaacgtgtttcg
atgccggacttcgacatcgacttctgcatggatcgccgcgaggaggtgatccaatacgtg
cagaagaaatacgggcgcgagaaggtgggccagatcatcaccttcggtgcgcttctgtcg
aaggccgccgtgcgcgacgtggggcgcgtgttgcagatgtcctacggccaggtcgacaag
ctgtcgaagctgatcccggtcgaaggcgtgaagcccgtcagcatcgagaaggcgctggcc
gacgagccgcgtctgcgcgaggcggcccgcaacgaagaggtcgtggcgcggcttctcgat
tacgcgaaggcgatcgaaggcctgctgcgcaacgcctcgacccacgcggcgggcgtcgtg
atcggcgaccgtccgatcgacgagctggtgccgctctatcaggatccgcgctcggacatg
cccgcgacccagttcaacatgaaatgggtcgagcaggcgggtctggtgaagttcgacttc
ctcggcctgaagacgctgacggtgatccgctcggcgatggaactgattttcaaatccggc
cggccgctgcatgtcgatgccgccggcaaccagctttacgagcccgccgagggcgcggaa
aaccacatcaacgcgattccgctggatgatccgaagacctacaagctttacgcggacgcg
aagacggtcgcggtgttccaggtggaatcggagggtatgaaatcggcgctgcgccagatg
aagcctacctgtatcgaggacatcgtggcgctggtggcgctctatcgcccgggtccgatg
gagaacatcccggtctattgcgaggtgaagaacggtctgcgcgagatcacttcggtgcat
ccgaccatcgaccatatcctcgaagagacgcagggcatcatcgtctatcaggagcaggtg
atgcaaatcgcgcaggtcatggcgggttactcgcttggcggcgcggaccttctccgtcgc
gcgatgggtaagaagatcaaggaggcgatggacgccgagcgtccgaaattcgaggcgggc
gcggccaagaacggggtcgacaagaagaaggcctccgaggtgttcgaccttctggagaaa
ttcgccaactacggcttcaacaaatcccacgcagcggcttatgcggtggtgtcctattac
accggctggctgaaggcgaaccacgcggtcgagttcatgggcggcgtgatgaactgcgat
attcatctgaccgacaagctcgcgatctatgccgacgaggtgcagaagaagctggggatc
gagatcattccgccttgcgtgaaccgttcgctctcgacctttgacgtggtcgatcagaag
ctggtctacgcgctgggcgcgctgaagaatgtgggcgtggacgcgatgcagatgatcgtg
accgcgcgcggcgacgagccgttcaaggatctgttcgatttcgcgcggcgtgtcgacatg
aagcgcgtcggtaaacgcccgctcgagatgctggcgcgggccggggctttcgatctgctc
gatccgaaccgcaagcgcgtcttcgagtcgctggaatcgctgatggcgtggtcgggcgcg
gtgatcgaggcgcgcgagtcggcgcaggtgtcgctgttcggcgaggcgggcgacgatctg
ccgccgccgcgtctggccgataccgacgactggctgccgggcgagcgtctggccgaggaa
cacaaagccatcggcttctacctctcgggccacccgatcgaggattacctgcccgcgctc
aagcgcaagaaggtgctgagctgggaagaggtgcagcaaaaggccgtgggcggtcccttc
gtcaccaagatcgcgggcgaggtcgcctcggtgcgcgagaagaaatccgccaagggcaac
cgcttcgccttcgtcgcgctgtcggatgcctcgggcccctacgaggtggctttctggtcg
gaggcgctggaagcctgccgcgacgtgctggaaaccggtaaccttctggtgctgaccgtg
aaggtcgaggtggatggcgagtcggtgcgcatggtcgccaacgcggcgcagaccgtggac
aaggcgacggcggatgcgggctcctccgggctgctggtgcatatcgacgacaatgatgcg
gtcgcctcggtggcgagcctcgtcgagcgggtcgcccgcgaagggaaggtccattcgcgc
gggccgatcagcttcatggtctatgacaacgagcgcggctgccgctaccagatcaccgcg
atgcccgaggcgccggtcaatgcgcaggtgaaaggagcgctgcgcagcctgcgcggggtc
agcgaggtcgaagaggtctga
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