Thioclava nitratireducens: BMG03_16650
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Entry
BMG03_16650 CDS
T04697
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thw
Thioclava nitratireducens
Pathway
thw03030
DNA replication
thw03430
Mismatch repair
thw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMG03_16650
03430 Mismatch repair
BMG03_16650
03440 Homologous recombination
BMG03_16650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thw03032
]
BMG03_16650
03400 DNA repair and recombination proteins [BR:
thw03400
]
BMG03_16650
Enzymes [BR:
thw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMG03_16650
DNA replication proteins [BR:
thw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMG03_16650
DNA repair and recombination proteins [BR:
thw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMG03_16650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
DNA_pol_A_exo1
PAS_8
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AQS49233
LinkDB
All DBs
Position
complement(3470007..3472103)
Genome browser
AA seq
698 aa
AA seq
DB search
MDLTRLSLRTRVFLFFAALALGNLAALVAGLWFGFTRLGDPDLLNAMVIGGTVAGFAILG
LIAWIWFLFDENVAKPIERLSGMLRARTTAEIEGEMDVDIARHLGDLAPAAASVTRHLSE
TRNALTEAVQRETTRLAQEKERLEALLSDVPVGVLLCTADHQLAFYNGQAVELLGSAHAP
GLDRRVFDYLNQPPIAHAYERLLATEDPDAASDLLCSTKAEGRVLAARMRLLSEGEDHYV
SKRPGYVLTLRDVSGDMAAHAQREQLMDELFDRIRRPAAALQSLIGVLTADDGPAPGSER
DRVREAANSEAHHLSAAIHEFFERHEANRADWWPLAMIRASDLGQAVAARVAAEGGAILP
VTAALMLRCEGFEMVALLAGLVRRLTDRRDFRLEITEDGPGALIALEWEGAPLPIGELER
WLAEPLDTGLEDVTGHRVLTTHAAEIWPEKLGDTRARLCIPLREARHVTKRPKPVPRAVV
YDFDLLARERVAEIADTPLTDLTYVVFDTETTGLLPTEGDEIVQIAAVRIVNGRRIDTEV
FDTLVDPKRPIPPGSTEVHGISNAMVEGAPDIAKVGRDFHRFAEGAVLIAHNAPFDMEFL
HRKEGAIGERFDHPILDTVLLSAVVFGQSESHTLDALTHRLGITIPEEARHTAIGDTVAT
ADAFLKMLPALQARGLRTFGELVAELRKHGRLLKDLNG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatctcacccggctctccctgcgcacccgggtgttcctgttcttcgccgcgctcgcg
ctcggcaatctcgcggcgctggtggcggggttgtggttcggcttcacccggcttggcgat
cccgatttgctgaacgctatggtgatcggcggcacggtcgcgggcttcgcgatccttggg
ctgatcgcctggatctggtttctgttcgacgagaacgtggccaaaccgatcgagcggctc
tcggggatgctgcgcgcccgcaccaccgccgagatcgagggcgagatggatgtcgatatc
gcgcgccatctgggcgatctggctcccgccgcggcctccgtcacgcgtcacctgtcggag
acccgcaacgccctgaccgaagccgttcagcgcgagacgacgcggctcgcgcaggagaag
gagcggctcgaggcgctcctgtcggatgtgccggtgggcgttttgctctgcaccgccgat
catcagctggccttctataacgggcaggcggtggagctcttgggctcggcccatgcgccg
gggctcgatcggcgcgttttcgattacctcaaccagccgcccatcgcccatgcctatgag
cgtcttcttgcgacggaagaccccgatgcggcctcggatctgctgtgttcgaccaaggcg
gaggggcgcgtgctcgccgcccggatgcggctgctgtcggagggtgaggatcactacgtc
tcgaagcgcccgggctacgtgctgacgctgcgcgacgtctcgggcgacatggccgctcat
gcgcagcgcgagcagttgatggatgagctgttcgaccgcatccgccgcccggccgccgcg
ctgcaatcgctgatcggggtcctgaccgccgacgacgggcccgctccgggttcggagcgg
gaccgggttcgcgaggccgccaattccgaggcgcatcacctctccgccgcgatccacgaa
tttttcgagcgccacgaggcgaaccgcgccgattggtggccgctcgcgatgatccgcgcc
tccgatctggggcaggcggtggccgcgcgggtagccgccgaagggggagcgatcctcccg
gtcacggccgcactgatgctgcgctgcgaggggttcgagatggtcgcgcttctggcgggt
ctggtgcgtcgcctgaccgaccggcgcgacttccggctggagattacagaggacggtccc
ggcgcgctgatcgcgctggaatgggaaggcgctccgcttccgatcggagagctggagcgc
tggcttgccgaaccgctcgacaccgggctggaagatgtgaccgggcaccgggtgctcacc
acccatgccgccgaaatctggcccgagaagctgggcgacacgcgtgcgcgcctgtgtatc
ccgctccgcgaggcgcgccatgtcaccaaacgcccgaagccggtgccgcgcgcggtggtc
tacgatttcgacctgcttgcgcgcgagcgcgtcgccgagatcgccgacacgccactgacc
gatctgacatatgtcgtgttcgacaccgagacgaccggcctgctgcccaccgagggcgat
gagatcgtccagatcgccgctgtgcgcatcgtcaacgggcggcggatcgataccgaggtc
ttcgacacgctcgtcgatcccaaacgcccgattccgcccggctcgaccgaggtgcatggc
atctcgaatgcgatggtcgaaggcgcgcccgacattgccaaggtggggcgcgacttccat
cgtttcgccgagggcgcggtgctgatcgcgcataacgcgcccttcgacatggaattcctg
catcgcaaggaaggcgcgatcggagagcggttcgatcatccgatcctcgacacggtgctg
ctgtcggcggtggtgttcgggcagtcggagagccacacgctcgacgcgctgacccacagg
cttggcatcaccatccccgaggaggcacgccacaccgcgatcggcgatacggtcgcgacg
gcggatgctttcctgaagatgctgccggcgctgcaggcgcgggggttgcggacgttcggc
gaattggtggcggagctgcgcaagcacgggcggctgctcaaggatctgaacgggtag
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