Thermoanaerobacter sp. X513: Thet_1132
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Entry
Thet_1132 CDS
T01317
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
thx
Thermoanaerobacter sp. X513
Brite
KEGG Orthology (KO) [BR:
thx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thx03016
]
Thet_1132
Enzymes [BR:
thx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Thet_1132
Transfer RNA biogenesis [BR:
thx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Thet_1132
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
RNA_binding
Hpr_kinase_N
SH3_CYT4
Motif
Other DBs
NCBI-ProteinID:
ADN54735
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All DBs
Position
1141886..1142434
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AA seq
182 aa
AA seq
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MRTFIGIDLDEKSIGKLSSFQEELKNYTIKGRWTHKDNFHITLKFLGEIETESVMKIKDS
LEVAVKDISPFYIKFDKVGFFKGNGDMRVLWVGTEENSFLNKLHDNIDEELYKIGFEKDK
RKFTSHITIARDIRLSIDIEEVNSLFEKQEKGAILVDTVFLYESVIQENRRKYIPIFSVP
LK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgtttattggaattgatttagatgaaaaatcaatagggaaattatcaagtttt
caggaagagttaaaaaattatacgataaaaggaagatggactcataaagataatttccat
attactttaaaatttctaggggaaatagaaacagaaagtgtaatgaaaataaaagactct
cttgaagtagcagtaaaagatattagtcccttttatataaaatttgacaaagtaggattt
tttaagggaaatggcgatatgcgagtattgtgggtaggtacagaagaaaattcctttctt
aataaactgcatgacaatatagatgaggaattatataaaattggctttgaaaaagataaa
agaaagtttacttcccacattaccattgccagagacatacgtttaagcattgacatagaa
gaagtaaatagtctttttgaaaaacaagaaaaaggagcaattttagtagatacagttttt
ttgtatgagagtgttatacaagaaaatagaagaaaatatattcctatatttagtgtgcct
ttaaaataa
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