Thermoanaerobacter sp. X513: Thet_1437
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Entry
Thet_1437 CDS
T01317
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thx
Thermoanaerobacter sp. X513
Pathway
thx03410
Base excision repair
thx03430
Mismatch repair
thx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thet_1437
03430 Mismatch repair
Thet_1437
03440 Homologous recombination
Thet_1437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thx03400
]
Thet_1437
DNA repair and recombination proteins [BR:
thx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Thet_1437
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thet_1437
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thet_1437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
ADN55036
LinkDB
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Position
complement(1413864..1416311)
Genome browser
AA seq
815 aa
AA seq
DB search
MGDLMSKIYRWILKENKDSRLSEEVQKTYGLPKIIADMLSARLNLQEVKSFLNPDLKDLY
SPYLLRGIKEAKDLIQQHIASKDLITIYGDYDVDGITATSILYLTLKKLGAKVDYYIPER
LVEGYGINEEAIDKIAQRGTKLIISVDCGITSVKEVEKAKFLGIDVIITDHHSIPKEIPQ
ADVVINPHLPDSEYPFCDLAGVGVAFKLSQALIGEEAYELLDIVSIGTIADIVPLLGENR
IIVKEGLKRLNETQNIGLKALIKASGLQNSEIDEYHVGFILAPRLNAAGRLRSAEAAVRL
LISQDEKEVEEIAEYLNQENLNRQQIENQILQEAIKKIKETVDLNKEKVIVLWDKNWHPG
VIGIVASRITERFHRPSILISLGEGEGKGSGRSIEGFNLYKALEYCKDYLIKYGGHEMAA
GINIEKNNLEIFKTKINEYADTVLSDLDLIPSLRIDAKVKNEKIDIEIAKQVQRFKPFGS
NNPRPNFLFEGLTVTKVFDLNGGKYKKIIVQKDKFVYELMLFDASEKGNDVKIGDVIDVV
GSIEINSWNGIELVVINVKDLRIKLPLFSYYKNLSKIMVEYKPDKKEIDKKVDYIIDQRG
INNKWEYVLKLFKGESKTVVIVNTIVELRSLLRYLKKEKFLDFSLCNVDCKKENGILFFP
NSLKPLKYYDDIIIYDIPFKKEIFYHILSHSQGKRIHLVFKEADIYYNLKSFDEIFPQRK
DFIKLYKFIEEGNNILFKEHLHPQLNLNPIKFSFCIKAMKEIGLINVKERDNIFMLSKNS
VSQKVNIEQARIMQQILSAKKEFIEFAKFIVSQKI
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgatttgatgtccaaaatttacaggtggattttgaaggagaataaagattctcga
ttgtctgaagaagtacaaaaaacttatgggttacccaaaataattgctgatatgctttca
gcaagattaaacctccaagaagttaagagttttttaaatcctgatttgaaagatttgtac
tctccttatcttctaaggggaataaaagaggcaaaagatttgatacaacaacatattgcc
tcgaaggatctaatcaccatttatggggattacgatgtagatggaattactgctacctct
atcctatatttaaccttaaaaaaattaggggcaaaagtggattattacataccagaaaga
ttagttgaaggatatggtataaatgaagaagcgatagacaaaattgcacagagaggaaca
aaacttataattagtgtagactgtggtataacctctgttaaggaagtggaaaaagctaaa
tttttgggaatagatgtaattataactgaccatcatagtatccctaaagagataccacag
gcagacgttgtgataaatcctcatttacctgatagtgaataccctttttgtgacctggca
ggggtaggggttgcttttaaactgtcacaagctcttattggagaagaagcttatgaactt
ttagatattgtttcaataggaactattgcagatattgtccctttattaggagaaaataga
ataattgtaaaagaaggactaaaaagactaaatgaaacacaaaatataggtttaaaagcc
ctcataaaagcttctggattgcaaaatagtgaaattgatgaatatcatgtgggatttata
ttagctcctcgcctcaatgctgcagggcgattaagaagtgcagaagcggctgtgaggtta
ttgataagccaagatgaaaaagaagtagaagagatagcagaatatttaaatcaagaaaat
ttaaataggcaacaaatagaaaatcaaatacttcaggaagcaatcaaaaaaataaaagag
acggttgatttaaataaggaaaaagtaattgtactgtgggataaaaattggcatccaggt
gttattggaattgtggcatcccggataacagaaaggtttcatagaccttctatacttata
agtttaggagaaggggaaggaaaaggttcagggcgaagcatagaaggctttaatttgtat
aaagcattagaatactgtaaagattatttgataaaatatggcggtcatgaaatggctgct
ggaataaatattgaaaaaaacaatttggagatttttaaaactaagataaatgaatacgct
gatacggtgcttagtgatcttgatttaattccaagtttaagaatagatgcaaaggttaaa
aatgaaaagatagatatagaaatagctaaacaagttcaaaggtttaaaccttttggcagc
aataatcctcggcctaattttttatttgagggtttgacagttacaaaagtatttgactta
aatggtggaaaatacaaaaaaatcatcgtccaaaaagacaagtttgtgtatgagcttatg
ctatttgatgcatcagaaaaaggaaacgatgtaaaaataggagatgtaatagatgttgtg
ggaagcattgaaataaatagctggaacggtatagagttagtagtgataaatgtaaaagat
ttaagaattaagttgcctttgttttcctactataaaaacttgagcaaaatcatggtagag
tataagcccgacaaaaaagagatagacaaaaaagttgattatataattgaccaaagagga
attaataataagtgggaatatgtgctgaaactttttaaaggagaaagcaaaacagttgtc
atagtaaatacaattgtagaacttaggtcattacttagatatctcaaaaaagaaaagttt
ttggatttttctttatgcaatgtggattgtaaaaaagaaaatggtatactatttttccca
aattctttaaaaccattaaaatactacgatgatataattatttatgatataccctttaaa
aaagaaatcttttaccacattctttctcattcacaaggaaagaggattcatttagttttt
aaagaagcagatatatattataacttaaaatcctttgacgaaatttttcctcaaaggaag
gactttattaaactttacaaatttatagaagaaggaaacaacattttatttaaagaacat
ttgcatccacaactgaatttaaatccaataaaattttcattttgcataaaagcaatgaaa
gaaataggattgataaatgtaaaagaacgtgataatatttttatgttaagcaaaaattct
gtgtcacaaaaggttaatattgaacaagctcgaataatgcaacagatactctcagctaaa
aaagagtttattgaatttgccaagttcattgtcagccagaaaatttaa
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