Thermococcus sp. P6: A3L12_00465
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Entry
A3L12_00465 CDS
T05739
Name
(GenBank) RNA-binding protein
KO
K12589
exosome complex component RRP42
Organism
thy
Thermococcus sp. P6
Pathway
thy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L12_00465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thy03019
]
A3L12_00465
Messenger RNA biogenesis [BR:
thy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
A3L12_00465
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
A3L12_00465
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ASJ09880
UniProt:
A0A218PAJ3
LinkDB
All DBs
Position
90729..91538
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AA seq
269 aa
AA seq
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MEIMAGIMRDHVLNLLREGARVDNRGLEDYRDLEVEVNVIEKAEGSALVKLGNTQVLVGI
KVDVGEPFPDLPDRGVITTNVELVPLASPTFEAGPPDENAIELARVVDRGIRESNAVDLE
KLVIVPGKLVRVIFVDVHVLDHDGNLLDASGIGAIAALLSTKIPKVTYDPEKEELQVLEE
YEPLPVGRIPIPVTMAKIGQNIVVDPTLEEERVMDGRITITTDENGMISSVQKGEGGSFK
LEEVMYAVDLAIRKAAEIREKVLKAVGSE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggagatcatggccggtataatgcgcgaccacgtcctgaaccttctcagggaaggggcg
agggtggacaatcgcggtctcgaggactaccgcgatctggaggtagaggtcaacgtcatc
gagaaggctgagggatcagctctggtgaagctcggcaacactcaggttctcgtaggcata
aaggtcgacgttggagaacccttcccggatctcccggacaggggggttataacgacgaac
gttgagctcgtcccccttgcctcgccgacctttgaagccggaccacctgacgagaacgcc
attgagctggcccgcgttgttgacagggggataagggaaagtaacgccgtggatctggag
aagctcgtcatagttcccggcaagctcgtcagggtgatcttcgttgacgttcacgtgctc
gaccacgacgggaacctcctcgatgcgagtggaataggcgccatagcggcccttctgagc
acgaaaataccgaaggtgacctacgaccctgagaaggaggagcttcaggttcttgaggaa
tacgaacccctgccggtggggaggattccaatcccggtcaccatggccaagatcggccag
aacatcgttgtggacccaacgctcgaggaggagcgcgtcatggacggcaggataacgatc
accaccgacgaaaacggcatgatctcctccgtccagaagggcgaagggggaagcttcaag
ctcgaggaggtcatgtacgccgtcgatctggcgatcaggaaggccgcggagataagggag
aaggttctgaaggcggttgggagcgagtga
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