Thermococcus sp. P6: A3L12_02055
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Entry
A3L12_02055 CDS
T05739
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
thy
Thermococcus sp. P6
Pathway
thy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L12_02055 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thy03021
]
A3L12_02055 (tfb)
Transcription machinery [BR:
thy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L12_02055 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L12_02055 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_IS1595
Zn_ribbon_Nudix
Zn_ribbon_RRN7
Trm112p
Sigma70_r4
Cyclin_N
Zn_ribbon_RPB9
Cyclin_C
A2L_zn_ribbon
Auto_anti-p27
DZR
Ribosomal_L37e
Lar_restr_allev
IBR_1
RB_B
YceG
Ribosomal_S27
LSU
Cas12f1-like_TNB
Zn_ribbon_recom
Zn_ribbon_ISL3
Zn_ribbon_6
Zn_ribbon_PriA
Motif
Other DBs
NCBI-ProteinID:
ASJ10161
LinkDB
All DBs
Position
complement(375026..375934)
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AA seq
302 aa
AA seq
DB search
MADRMVCPRCGSKLIYDRQHGEYYCSSCGYVVRQNIVDNGPEWRAFDPNQRARRARTGAP
MTLMIHDKGLSTDIDWRDRDVNGNQIKGMYRMKMRRLRMWQRRMRINDAAERNLAFALSE
LDRMAAQMMLPRHLKEAAASIYRKAVAKKLIRGRSIEGMVSAALYAACRMERMPRTLDEI
AEVSKVKKKEIGRSYRFLVKGLNLNLRPTSPVDYVDRFGDALSVSYRTKKRAKEILQKAI
KRGITSGKGPTGLAAAALYVASILEGEKKTQREVAEVAHVTEVTVRNRYKELVERLNINV
PV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataggatggtatgtccgaggtgtggctccaagctgatttatgaccgacagcat
ggggagtattattgcagtagctgtggttacgtcgttcggcagaacattgttgataacggt
ccggagtggcgcgcgttcgacccaaaccagagggcaaggcgtgccagaaccggtgcaccc
atgacgctgatgatccacgataagggtctctccacggacatagactggcgcgatagggac
gtaaacggcaaccagataaaggggatgtacaggatgaagatgagacggctgagaatgtgg
cagcgcaggatgaggataaacgatgccgccgagaggaacctcgcctttgcccttagcgaa
cttgacaggatggccgcccagatgatgctgccgagacaccttaaggaggccgccgcctcc
atctacagaaaggccgtcgcgaagaagctcatacgcggaagatcaatagaggggatggta
tccgcagccctttacgcagcatgcaggatggagagaatgcccagaaccctcgatgagata
gccgaagtttccaaggtcaaaaagaaggagatagggcggagttaccgcttccttgtaaag
ggtcttaacctgaacctcaggcccaccagtcctgtggattacgttgaccgctttggagat
gcgctctccgttagttacaggacgaagaagcgcgccaaggagatactccagaaggccatc
aaaaggggtataacgagcggcaaaggccccacgggtcttgcggcggctgccctctacgtg
gcctcgatccttgagggggagaagaaaacccagcgtgaagttgcggaagtggcgcacgtt
acggaagtgaccgtcaggaacaggtacaaggaactcgtggagaggctcaacataaacgtc
ccggtgtga
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