Thermococcus sp. P6: A3L12_03815
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Entry
A3L12_03815 CDS
T05739
Name
(GenBank) DNA repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thy
Thermococcus sp. P6
Brite
KEGG Orthology (KO) [BR:
thy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thy03400
]
A3L12_03815
DNA repair and recombination proteins [BR:
thy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3L12_03815
Archaeal homologous recombinant proteins
A3L12_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
Rad50_zn_hook
AAA_21
AAA_23
AAA_15
AAA_13
AAA_29
NPV_P10
ABC_tran
MCPsignal
Tropomyosin
SbcC_Walker_B
FtsK_SpoIIIE
Baculo_PEP_C
Laminin_II
ABC_ATPase
AAA_27
DUF6674
Snapin_Pallidin
Seryl_tRNA_N
HMBD
DUF6011
RsgA_GTPase
DUF7575
DUF1664
Motif
Other DBs
NCBI-ProteinID:
ASJ10486
UniProt:
A0A218PCA4
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Position
711092..713749
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AA seq
885 aa
AA seq
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MKIEKLIVADFRSHRLTQVEFKDGINLIIGQNGSGKSSLLDALLIGLYWPSRPKDLRKGD
FLRIGGNSTEITVYFEKEGVRYQVHRKITKGVAFAKYHDGTSWKHVSETSHKTVRDWMEK
LIPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENAYNNLLEVRKEIDRRIK
STEEFLKRTENIDELIRDMEKKLEKTLKEIKELSRRIPELEKELKEAREKLNHLKELKGK
IDSLRLEIKESEGRKEALKSKLAELEKRISEGEKKVKELEEKVKELKGLKERSEQYLNLL
KFRGYYVEERGKNEGLAGKYRTGIEEIEKRLAELEKVEKQLAGMKKKADELRKKLRELEE
EAKRYEKVKTLLKQLKDQRNRLKYSEEEIANLSSRIEEAKARREEILEELQKIQGELGGL
KNLIGERNRAIKELEGATGRCPVCGRELTEEHRNEIIERYRREVLEASGEVKRLKERKED
LNRELREITEILKGERELTEQKTILEDIKRLEGELKKYNVEELRRKGKEYEKSREDLNRL
EGELKSMENELKKREELENRKKDLEEKLRSVELRLKELDKELRERGFSSVGELDAKLEEL
KPFYERYLQLKGSEEELKREREKLEGLRGEREETERNLKAEEENLKALKEELKEKEALYS
EEEHKRTEELVYSLGEELAGMRANLKALSKERDELTNNLGRLREEKELRIRKRKELEGLR
KAREDVQKLREKLKRYKAMLRENALSKVGELASEIFEELTEEKYSGITVRAEEKKVRLGV
VYDGREYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDEERRRRLVDIM
QRYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSRVEEVRMEV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgagaagctcatcgtggccgatttccgatctcaccggttaactcaggtcgag
ttcaaggacgggataaacctgataatcggccagaacggaagcggtaagagctccctcctc
gacgcgctcctcatcggcctctactggcccagcagaccgaaggacctgaggaagggggac
tttctcaggataggagggaactccacggagataaccgtctacttcgagaaggaaggcgtt
aggtatcaggtccatagaaaaataacgaagggcgtggcctttgcgaagtatcacgacgga
acgtcgtggaagcacgtttccgagaccagccataagaccgtaagggactggatggaaaag
ctcatcccgtacgatgtttttctcaacgccatttacataaggcagggcgaaatcgatgcg
atcctcgagagcgacgagagcagggagaaggtggtgaggcaggttctcggccttgacagg
tacgaaaacgcctacaacaacctcctcgaagtgaggaaggagatagacagaaggataaaa
tcgacggaggagttcctgaaaaggacggagaacatcgacgaactcatcagggatatggag
aaaaaactcgagaagaccctcaaggagataaaggaactctccagaaggattccggagctg
gagaaagagctgaaggaggcgagagaaaagctcaaccacctcaaggagcttaagggaaag
atcgatagcctcaggctcgagatcaaggaaagtgaaggaaggaaggaagccctcaagagc
aagctggccgaactcgagaaacgcatctccgagggcgagaaaaaggtgaaagagctggag
gagaaggttaaggagctaaagggacttaaggaacggagcgagcagtacctaaatctattg
aaattcagagggtactacgtggaggagaggggaaaaaacgaagggctggccgggaaatac
aggacgggaatagaggagatcgaaaaacgcctcgccgagctggagaaggttgaaaagcag
ctcgccgggatgaagaagaaggccgacgagctcaggaaaaagttgagggagctggaggag
gaagccaaaaggtatgagaaggttaaaaccctgctgaaacagctaaaagaccagagaaat
cgcctgaagtactccgaggaagaaatagcgaatctttcctccagaatcgaggaagcaaaa
gcccggagggaggagattctggaggaacttcagaagatacagggggaactcggcgggctc
aagaacctcataggtgagaggaacagggcgataaaggagctggagggggcaacgggcagg
tgtcccgtctgcggcagggagctgacggaggaacaccggaatgagataatcgaaaggtac
agaagggaggttttagaagcctccggggaagttaagaggctcaaggagaggaaagaagac
ctgaacagagaactccgggaaataacagagattctgaagggggagcgggaactcacggag
cagaagacgatactcgaggatatcaaaaggctcgagggggagctgaagaaatacaacgtc
gaagaactgcgtagaaaagggaaggaatacgagaagagcagggaagacctgaacaggctt
gagggcgagctaaagagcatggaaaatgagcttaaaaagagggaagagctcgaaaacagg
aaaaaagacctcgaggagaagctcaggtccgtggagctccggctgaaggaactcgataaa
gagctccgggagaggggtttctcgagcgtcggggagctcgatgcgaagctcgaagagctc
aaaccgttctacgagaggtacctccagctgaagggttcggaagaggagctcaaaagggag
cgggagaaactggaggggctccggggggagcgcgaggagacggaaagaaacctcaaagca
gaggaagaaaatctgaaggcgcttaaggaggaactaaaagagaaggaagcactttacagc
gaggaagagcataaaagaaccgaagaactcgtctattcactgggtgaagagctggcaggg
atgagggcgaatctaaaagccctttcaaaggagcgcgatgaactcacgaacaacctcggt
agactcagggaggagaaggaactcaggatcagaaagaggaaggaactggaaggtctcagg
aaagcccgcgaagatgttcagaagctgagggaaaagctaaagcgctacaaggccatgctg
agggagaacgccctctcaaaggtcggcgagctggcaagcgagatattcgaggaactcacg
gaggagaagtattcggggataaccgtcagggccgaggagaagaaggtaagactcggggtg
gtgtacgacggcagagagtacggcctcggtttcctcagcggtggggagaggatagccctt
ggtctggccttcaggctcgcactgtccctctatctggcgggggagataagcctgctgatt
ctggacgaaccgacgccctacctcgacgaggagaggaggagaaggctcgttgacataatg
cagcgctatttaaggaagatccctcaggtgatagtcgtttcccacgacgaagaactgaag
gacgctgcggacagggtgataagggttagcctcgagaacggcgtatcaagggtcgaagag
gtaaggatggaggtgtga
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