Thermococcus sp. P6: A3L12_04065
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Entry
A3L12_04065 CDS
T05739
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
thy
Thermococcus sp. P6
Pathway
thy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L12_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thy03021
]
A3L12_04065
Transcription machinery [BR:
thy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
A3L12_04065
Prokaryotic type
Archaeal type
TFE
A3L12_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7342
GntR
HTH_Crp_2
TrmB
Rad50_zn_hook
Sigma70_r3
HTH_3
HTH_DeoR
HTH_9
HTH_26
Rrf2
HTH_PafC
HTH_24
Zn_Ribbon_TF
HTH_IclR
Prefoldin_2
HTH_20
RepL
HTH_5
HTH_11
EAP30
POLR3C_WHD
Mnd1
zf-C2HC_2
HTH_15
DUF2304
Motif
Other DBs
NCBI-ProteinID:
ASJ10530
UniProt:
A0A218PCA7
LinkDB
All DBs
Position
complement(759556..760077)
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AA seq
173 aa
AA seq
DB search
MAKKKNRELLELAMDIGGEEAIEVVKALKKKRDVTDEELAEATGIRVNTVRKVLYMLYDQ
GLAEFKRIRDKETGWYYYYWRLEVKRLPEIIRARKMAELKKLREMLREETENTYYHCGTP
GHPKLTFDEAMEYEFQCPICGRMLMQYDNTAVVEDLKRRIKELETELGLRKKA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagaagaagaacagggaactcctcgagctggcgatggacatcggcggagaggaa
gcgattgaggtagtcaaggctctcaaaaagaagagggacgtaaccgacgaggaacttgcc
gaggccacgggcatcagggtcaacaccgtcaggaaggtcctctacatgctctacgatcag
ggactggcggagttcaagcgcatccgcgataaggaaacaggctggtattactactactgg
cgccttgaggtcaagcgcctacccgagataatccgggccagaaagatggccgaactgaag
aagctcagggagatgctcagggaggagaccgagaacacctactaccactgcggtaccccc
ggacatccgaaactgacctttgacgaggccatggagtacgagttccagtgcccgatatgc
ggcaggatgctcatgcagtacgacaacacggccgtcgttgaggacctgaaaaggcgcatc
aaagaactcgagaccgaactgggccttagaaagaaggcatga
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