Thermococcus sp. P6: A3L12_06565
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Entry
A3L12_06565 CDS
T05739
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
thy
Thermococcus sp. P6
Pathway
thy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
thy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L12_06565 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thy03021
]
A3L12_06565 (tfb)
Transcription machinery [BR:
thy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L12_06565 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L12_06565 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Sigma70_r4
ADK_lid
RUBY_RBDX
HTH_AsnC-type
Zn_ribbon_IS1595
RB_B
HTH_Tnp_ISL3
ORC6
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ASJ10985
UniProt:
A0A218PDM6
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All DBs
Position
1217210..1218109
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AA seq
299 aa
AA seq
DB search
MGKRRVCPICGSTEFIYDPSRGERVCKVCGYVIEENIVDTGPEWRAFDAGQREKRARVGA
PESILLHDKGLSTDIGIDRRVSGLMREKIYRMRRWQSRLRISDAAERNLAFALSELDRVA
SQLKLPRYVEEEAARLYREALKKGLIRGRSIESVITACVYAACRLLKVPRTLDEVADISR
VDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVDKFADELGLNDRVRKRAVKILEEAYEKG
LTSGKSPAGLVAAALYIAGLMEDDKRTQREVAEVARVTEVTVRNRYKELVERLNLKVPI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaaacgcagggtgtgtccgatttgtggttcgacggagttcatctacgacccgagc
aggggagagagggtatgtaaagtttgcggttacgtcatcgaggagaacatcgtggacacg
ggtcccgagtggcgtgccttcgatgcgggccagagggagaagagggcccgtgttggtgcc
cccgagagcattctgcttcacgacaagggcctctcaacggacatcggaatcgacagacgt
gtttccggcctgatgcgcgagaagatctacaggatgagaaggtggcagtcccgcctgagg
ataagcgacgccgccgagcgtaaccttgccttcgccctgagcgagcttgacagggttgcc
agccagctgaagcttccgaggtacgttgaggaggaggccgcgaggctctaccgtgaggcc
ctgaaaaagggccttataaggggacgctcgatcgagagcgtcatcaccgcctgcgtttac
gctgcgtgcaggctcctgaaggttccgagaaccctcgatgaagtggcagacatatcccgc
gtcgacaaaaaggagataggaagaagctaccgcttcatcgccagaaacctcaaccttaca
ccgaagaaactcttcgttaaacccacggattacgttgataagtttgccgacgagctgggg
ctgaatgatagggtcaggaaaagggcggttaagatactggaggaggcgtacgaaaaggga
ctgacaagcggtaagagccccgcgggcctcgtcgccgctgccctctacatcgccggcctc
atggaggacgataaaagaacccagagggaagttgcggaagtggcgcgcgttaccgaggtg
accgtcaggaacaggtacaaggaactcgtggagaggcttaacctgaaggtcccgatttga
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