Thermococcus sp. P6: A3L12_06815
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Entry
A3L12_06815 CDS
T05739
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
thy
Thermococcus sp. P6
Pathway
thy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3L12_06815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thy03019
]
A3L12_06815
03009 Ribosome biogenesis [BR:
thy03009
]
A3L12_06815
Enzymes [BR:
thy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3L12_06815
Messenger RNA biogenesis [BR:
thy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3L12_06815
Ribosome biogenesis [BR:
thy03009
]
Prokaryotic type
rRNA helicases
A3L12_06815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASJ11033
LinkDB
All DBs
Position
1264013..1265179
Genome browser
AA seq
388 aa
AA seq
DB search
MSFESLGLSEATLVAVREKGFETPTDIQREVIPRLISGEKDIIGQSQTGTGKTAAFALPI
LEAVDPELLAVQAIVLTPTRELALQVADEIRSLRGRKRVYVYAVYGGQPIGPQIRALERG
THVVVGTPGRILDHIRRGTLDLGSVRFFILDEADRMLDMGFIDDIEAIFRETPRQKRVLM
FSATMPAAIKRLARRYMTNHEVISVSSDSLVPEMVDQEYVEVLPGRKFNVLRKVLDDNFY
GIVFCATKRETRELSERLRRAGYPAEALNGDMSQAARERTFRRFKNRKTRILVATDVAAR
GWDVRNITHVVNYSLPMTPEDYVHRIGRTGRMGRRGKAVTFVVPGERDRLDYFARRAGVE
VKRSELSEELSDYRGRNYRRPKNYRGRW
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaagcttgggtttatccgaggccacgctggtggccgtcagggaaaagggt
tttgaaaccccaacggacattcagagggaggtaatcccgcgccttatatcgggtgaaaag
gatataatcggccagtcccagaccgggaccggaaagaccgccgccttcgccctgccgata
ctcgaggccgtcgatcctgaactgcttgcagttcaggccatagtgctcacccccacgagg
gagctcgcccttcaggtggcggacgagatcaggagcctccgcgggaggaagagggtttac
gtttacgccgtctacgggggccagccgataggaccccagatcagggcgcttgagagggga
acccacgtcgtggtgggaacccccgggaggattctcgaccacataaggcgcggaaccctc
gatctcgggtccgtgaggttcttcatcctcgacgaagcggacaggatgctcgacatgggc
tttatcgatgatatagaggcgattttcagggagacccccagacagaagagggtgctgatg
ttctccgccacgatgccggctgccattaaaaggctcgcgagacgctacatgaccaaccac
gaggtgataagcgtcagcagtgacagcctcgttcccgagatggtggatcaggagtacgtc
gaggttcttccgggaagaaagttcaacgtgctgaggaaggtgctcgacgataacttctac
ggtatcgtcttctgcgccaccaagagggagacccgcgagctgagcgagaggctcaggagg
gccggctacccggccgaggctttaaacggcgacatgagtcaggccgcacgcgagagaacc
ttcaggcgctttaaaaaccggaagacgaggatcctcgtggcgacggacgtggcagcgagg
ggatgggacgttcggaatataacccacgtcgtgaactactccctgccaatgacgcccgag
gattacgtccacaggataggcaggaccggaaggatgggcaggcgcggaaaggcggtaacc
ttcgtggtccccggcgagagggacaggctggactacttcgcccggagggccggcgttgag
gtgaagaggtcggagctcagcgaggagctttcggactacagagggcgcaactaccgccgt
cctaagaactaccgaggtagatggtga
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