KEGG   Thermotomaculum hydrothermale: TTHT_0123
Entry
TTHT_0123         CDS       T06993                                 
Symbol
rny
Name
(GenBank) ribonucrease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
thyd  Thermotomaculum hydrothermale
Pathway
thyd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TTHT_0123 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thyd03019]
    TTHT_0123 (rny)
Messenger RNA biogenesis [BR:thyd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TTHT_0123 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 V-ATPase_G_2 HDOD KH_2 KhpA-B_KH NPV_P10 FUT8_N_cat Cas3_HD Prominin
Other DBs
NCBI-ProteinID: BBB31766
UniProt: A0A7R6PP33
LinkDB
Position
119459..121024
AA seq 521 aa
MTIVPWIIAGALFLILLGLIGFIAYKSRKDRQLLETAEYKVKNIIESAKKEAEQIKKAAE
IEVREIKQQIRDKIEKELEGKRRHLEELEKKLDKKEDILEQRSNYLDKKDLELQQKEREL
KQLQEGLIKDREELQKLISKEMETLEQISGYSREEAKRELMRLLEEDAKKDIVKKLRKME
EEAEFTAKNKAREIISLAIQKSASDYVSESTVSVVDLPNDEMKGRIIGREGRNIRAIEKA
TGVDLIIDDTPEAVILSSFDPIRREVARLALEKLIADGRIHPARIEDVVEKVKLELDAEI
KKEGENTVFELGIGDIHPKLIKLIGRLKYRTSYGQNILQHSKEVAYIAAFMAHELGANVK
VAKRAALLHDIGKAIDKEVEGTHVEIGVDLLRRFGESEEVIHAVEAHHGDVEPKTVEAVI
VQSADALSAARPGARREILESYIRRLEKLEEIASSFEGVHKSYAIQAGREIRVIVNSDLV
DDDKIYWLSKEIARRIEEELDYPGQIKVTIIRETRAVEYAR
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgactattgtaccgtggattattgcaggagctcttttcctgattctgctgggtttgata
ggttttattgcctataaatccagaaaagacagacagcttcttgaaactgccgaatataaa
gtaaaaaatatcattgaaagcgcaaaaaaagaagcagagcagataaaaaaagcggcagag
attgaagtaagagaaatcaaacaacagattagagacaagattgaaaaagaattagaaggc
aaaagaagacatcttgaagagttagagaaaaagttagacaagaaagaggacattttagag
caaaggtctaattaccttgacaagaaagaccttgaattgcaacagaaggaaagagaatta
aagcagttgcaggaaggccttattaaagacagagaagaattgcagaaattaatttccaaa
gagatggagactttggagcagatttcaggttattcaagggaagaggctaagagagagtta
atgaggttgcttgaagaagacgctaaaaaggatattgttaaaaagctcagaaaaatggaa
gaagaagctgagtttacagccaaaaacaaggcaagggaaattatcagccttgctattcaa
aaatctgcctcagactatgtttcagaatccacagtttctgttgtggatttgcctaacgat
gagatgaagggtagaattattggtagagagggaagaaatatcagggcaattgaaaaggca
acaggggttgatttaattattgacgatacccctgaggctgtaattttatcctcatttgac
ccaataagaagggaagttgcaaggcttgcacttgaaaaacttattgcagacggcagaatt
caccctgcgagaattgaagatgttgtagaaaaggtaaaacttgagcttgatgcagaaatc
aaaaaagagggtgaaaacactgtatttgaattaggaataggagatattcaccctaaactt
ataaaattaattggaaggttgaagtacagaacttcttatggccagaatattttgcagcac
tctaaagaggttgcatacattgccgctttcatggctcatgagttaggggcaaatgttaag
gttgcaaagagggctgcacttctccacgatataggaaaggctattgacaaagaggttgag
ggaacacacgttgaaataggtgttgatttgttgaggcgtttcggcgaatctgaagaggtt
atccatgctgttgaggcacaccacggagatgttgaaccaaagacagttgaggcggttata
gttcagtctgcggatgctttaagcgcagcaaggcctggcgcaagaagagaaattctggaa
agttatataagaaggcttgaaaagcttgaagaaattgcttcctcttttgaaggggtacat
aaatcctatgctattcaggcaggaagagaaatcagggttattgttaacagcgaccttgtt
gacgatgataaaatctactggctttcaaaagagatagcaagaaggattgaagaagagtta
gattatccgggacagattaaggtaaccattataagggaaacaagggctgttgagtacgca
aggtaa

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