Thermotomaculum hydrothermale: TTHT_0123
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Entry
TTHT_0123 CDS
T06993
Symbol
rny
Name
(GenBank) ribonucrease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
thyd
Thermotomaculum hydrothermale
Pathway
thyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TTHT_0123 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thyd03019
]
TTHT_0123 (rny)
Messenger RNA biogenesis [BR:
thyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TTHT_0123 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
V-ATPase_G_2
HDOD
KH_2
KhpA-B_KH
NPV_P10
FUT8_N_cat
Cas3_HD
Prominin
Motif
Other DBs
NCBI-ProteinID:
BBB31766
UniProt:
A0A7R6PP33
LinkDB
All DBs
Position
119459..121024
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AA seq
521 aa
AA seq
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MTIVPWIIAGALFLILLGLIGFIAYKSRKDRQLLETAEYKVKNIIESAKKEAEQIKKAAE
IEVREIKQQIRDKIEKELEGKRRHLEELEKKLDKKEDILEQRSNYLDKKDLELQQKEREL
KQLQEGLIKDREELQKLISKEMETLEQISGYSREEAKRELMRLLEEDAKKDIVKKLRKME
EEAEFTAKNKAREIISLAIQKSASDYVSESTVSVVDLPNDEMKGRIIGREGRNIRAIEKA
TGVDLIIDDTPEAVILSSFDPIRREVARLALEKLIADGRIHPARIEDVVEKVKLELDAEI
KKEGENTVFELGIGDIHPKLIKLIGRLKYRTSYGQNILQHSKEVAYIAAFMAHELGANVK
VAKRAALLHDIGKAIDKEVEGTHVEIGVDLLRRFGESEEVIHAVEAHHGDVEPKTVEAVI
VQSADALSAARPGARREILESYIRRLEKLEEIASSFEGVHKSYAIQAGREIRVIVNSDLV
DDDKIYWLSKEIARRIEEELDYPGQIKVTIIRETRAVEYAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgactattgtaccgtggattattgcaggagctcttttcctgattctgctgggtttgata
ggttttattgcctataaatccagaaaagacagacagcttcttgaaactgccgaatataaa
gtaaaaaatatcattgaaagcgcaaaaaaagaagcagagcagataaaaaaagcggcagag
attgaagtaagagaaatcaaacaacagattagagacaagattgaaaaagaattagaaggc
aaaagaagacatcttgaagagttagagaaaaagttagacaagaaagaggacattttagag
caaaggtctaattaccttgacaagaaagaccttgaattgcaacagaaggaaagagaatta
aagcagttgcaggaaggccttattaaagacagagaagaattgcagaaattaatttccaaa
gagatggagactttggagcagatttcaggttattcaagggaagaggctaagagagagtta
atgaggttgcttgaagaagacgctaaaaaggatattgttaaaaagctcagaaaaatggaa
gaagaagctgagtttacagccaaaaacaaggcaagggaaattatcagccttgctattcaa
aaatctgcctcagactatgtttcagaatccacagtttctgttgtggatttgcctaacgat
gagatgaagggtagaattattggtagagagggaagaaatatcagggcaattgaaaaggca
acaggggttgatttaattattgacgatacccctgaggctgtaattttatcctcatttgac
ccaataagaagggaagttgcaaggcttgcacttgaaaaacttattgcagacggcagaatt
caccctgcgagaattgaagatgttgtagaaaaggtaaaacttgagcttgatgcagaaatc
aaaaaagagggtgaaaacactgtatttgaattaggaataggagatattcaccctaaactt
ataaaattaattggaaggttgaagtacagaacttcttatggccagaatattttgcagcac
tctaaagaggttgcatacattgccgctttcatggctcatgagttaggggcaaatgttaag
gttgcaaagagggctgcacttctccacgatataggaaaggctattgacaaagaggttgag
ggaacacacgttgaaataggtgttgatttgttgaggcgtttcggcgaatctgaagaggtt
atccatgctgttgaggcacaccacggagatgttgaaccaaagacagttgaggcggttata
gttcagtctgcggatgctttaagcgcagcaaggcctggcgcaagaagagaaattctggaa
agttatataagaaggcttgaaaagcttgaagaaattgcttcctcttttgaaggggtacat
aaatcctatgctattcaggcaggaagagaaatcagggttattgttaacagcgaccttgtt
gacgatgataaaatctactggctttcaaaagagatagcaagaaggattgaagaagagtta
gattatccgggacagattaaggtaaccattataagggaaacaagggctgttgagtacgca
aggtaa
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