Thermotomaculum hydrothermale: TTHT_0539
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Entry
TTHT_0539 CDS
T06993
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thyd
Thermotomaculum hydrothermale
Pathway
thyd00550
Peptidoglycan biosynthesis
thyd01100
Metabolic pathways
thyd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TTHT_0539 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TTHT_0539 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thyd01011
]
TTHT_0539 (mrdA)
Enzymes [BR:
thyd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TTHT_0539 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thyd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
TTHT_0539 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF4227
Motif
Other DBs
NCBI-ProteinID:
BBB32125
UniProt:
A0A7R6SY04
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All DBs
Position
559092..560819
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AA seq
575 aa
AA seq
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MYGEKHPLIKFRILFFYITVITVFSLLFVRYWYLQVVKGEYYYKASRENTLRVLPLIAKR
GEIYAMSGEKIATYKPAFNIMLDRNRFNKKHIKKIAEFLKIDEKELRERIKKYSNIPRYI
SVAIKENVSIEFLSYFEARKADYPELFVDVEPLRFYPYRDLVAHVLGYIGEPTVQELKKI
GEYTFIGKSGIEKEYDEILRGKNGIKRLIVDSGNRLKEEKIVTKPVDGKKLTLSLIIPLQ
ELIKTQLRQYKGCVIVNNVNTGEIYALYSNPSFDPNVFSSRFERKKWKNLKKAKGNPLLN
RAIRGRYSPGSIFKVAVALSALEKGISPKTTFFCPGYFKYKDLEFKCWFEPGHGKLNMIG
GIAHSCNVYFYNLGLKVGVENIDSTCFKIELCEKTGIDIPGEKKGLLPTPEWKRMKIGQP
WYPGDTINLSIGQGYLLVTPIEVARFVSMVANGGKLITPHFLVSPERKFEVKDLNINKNH
ILILKKAMRKVVTQGTAIKLSFLKIKVAGKTGTAQTISGGEGKENNSWFSGFAPYENPQI
CVTVIAEKGGHSTDIAVPVAGKVFEFYAKNRELFK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtacggtgaaaagcaccctttaattaaatttagaattctctttttttacatcacagtg
ataactgtgttttccctattgtttgtacgatactggtacctacaggttgtaaagggggaa
tactattacaaagcatccagagaaaatactttaagggttttacctttaattgcaaaaagg
ggagagatttatgcaatgtctggtgaaaagatagcaacatacaaacctgcctttaatata
atgcttgatagaaataggtttaacaaaaagcatataaaaaaaattgctgaatttttgaaa
atagatgaaaaagagttaagagaaagaattaaaaaatactcaaatatccctcgctatata
tctgttgcaattaaagaaaatgtttctattgaatttctttcttattttgaggcaaggaag
gctgattacccggagttgtttgtggatgttgagcctttaaggttttacccttacagggat
ttggttgcccatgttttaggatatattggtgagcctacagttcaagagttaaaaaaaata
ggggaatatacctttataggaaaatctggaatagagaaggagtatgacgagattttaaga
ggtaaaaacggaataaaaaggcttattgttgattcaggaaacaggctaaaagaggaaaaa
attgtaacaaaacctgtcgatgggaaaaaactcactctttctttaattattccattgcaa
gaactaataaagacccagttaaggcaatataaaggttgtgtaattgtcaataatgttaat
acaggtgagatttatgctttatattcaaacccatctttcgatccgaatgtcttttcttca
aggtttgaaagaaaaaaatggaaaaatttgaaaaaggctaaaggaaaccctctattaaac
agggcaataaggggcagatattctccaggttctattttcaaagtcgcagttgccctttct
gctttagaaaaggggatatctcctaaaactacttttttctgtcccggatattttaagtac
aaagaccttgaatttaagtgctggtttgaacctgggcatggaaagttgaatatgatagga
gggattgcacattcctgtaatgtatatttttataatttagggttaaaggttggagttgaa
aatatagactctacatgctttaagattgaattatgtgagaaaacaggtatagatatccct
ggagaaaagaaaggactattaccaactcctgaatggaagagaatgaaaattggccagccc
tggtatcccggggacacaattaacctttctatagggcagggttatcttcttgttaccccc
attgaagtggcaagatttgtatcaatggttgccaatggagggaagttgataacccctcat
tttctcgtttctcctgagagaaagtttgaggtaaaggatttgaatataaataaaaatcat
attcttattcttaaaaaggctatgagaaaggttgtaactcagggtacagcaattaagtta
tcctttttaaaaataaaagttgctggaaaaacaggtactgctcaaactatttcaggtggt
gaaggaaaagagaataactcgtggttttcaggttttgctccatacgaaaatccccagata
tgcgtgacagttattgcagaaaaaggagggcatagtactgacattgccgttcctgtagca
ggaaaggtttttgaattttacgctaaaaacagggagttatttaaatga
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